RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ICE1Q9Y2F5 2266 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 NFASCO94856 1347 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 CKBP12277 381 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 IL1R1P14778 569 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 GRIA1P42261 906 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 GRIK4Q16099 956 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 ITIH5Q86UX2 942 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 JAZF1Q86VZ6 243 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 GEMIN6Q8WXD5 167 aaKnown RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 COMMD4Q9H0A8 199 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 MIOSQ9NXC5 875 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 FBXL21Q9UKT6 434 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 PCDHB5Q9Y5E4 795 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 A0A1W2PP18 115 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 NT5C1B-RDH14C9J2C7 533 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 ELK4P28324 431 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 KCNJ11Q14654 390 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 TSTQ16762 297 aaKnown RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 MSANTD1Q6ZTZ1 278 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 KAT2AQ92830 837 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 OR52B2Q96RD2 323 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 WDR18Q9BV38 432 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 FGFBP2Q9BYJ0 223 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 TNKS2Q9H2K2 1166 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 INTS7Q9NVH2 962 aaKnown RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 WRBO00258 174 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 NUAK1O60285 661 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 KERAO60938 352 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 GSTM2P28161 218 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 ARSFP54793 590 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 GDF10P55107 478 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 NFATC3Q12968 1075 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 FUZQ9BT04 418 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 TMEM168Q9H0V1 697 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 POLR2J3Q9H1A7 115 aaKnown RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 MTIF3Q9H2K0 278 aaKnown RBP8.62□□□□□ -1.03
COL6A6-201ENST00000358511 BRD7Q9NPI1 651 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 HMGXB4Q9UGU5 601 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 ASB3Q9Y575 518 aa8.62□□□□□ -1.03
COL6A6-201ENST00000358511 CHD5Q8TDI0 1954 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 ABHD14A-ACY1A0A1B0GW23 586 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 DISC1C4P0D8 188 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 H3BRB1 525 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 TYROBPO43914 113 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 GADD45GO95257 159 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 HPRP00739 348 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 CHRNB2P17787 502 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 CD247P20963 164 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 CPN2P22792 545 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 PROZP22891 400 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 MYF6P23409 242 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF311Q5JNZ3 666 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 BRMS1LQ5PSV4 323 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 OR52E8Q6IFG1 317 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF782Q6ZMW2 699 aaPredicted RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 FAM83AQ86UY5 434 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 HJURPQ8NCD3 748 aaPredicted RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 SLC38A4Q969I6 547 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 CNDP2Q96KP4 475 aaKnown RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 TSNAXQ99598 290 aaKnown RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 CCDC106Q9BWC9 280 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 TUT1Q9H6E5 874 aaKnown RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF282Q9UDV7 671 aaPredicted RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 C5orf51A6NDU8 294 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 MCIDASD6RGH6 385 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 ABL2P42684 1182 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 CDKL1Q00532 357 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 TARDBPQ13148 414 aaKnown RBP eCLIP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 FAM151BQ6UXP7 276 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 TMEM199Q8N511 208 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 OR4C6Q8NH72 309 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 GATAD2BQ8WXI9 593 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 MROH8Q9H579 483 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 ELAC1Q9H777 363 aaKnown RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 IPPKQ9H8X2 491 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 TRIM36Q9NQ86 728 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 LAMB1P07942 1786 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 MOXD2PA6NHM9 499 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 DCLK1O15075 740 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 BUD23O43709 281 aaKnown RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 GATBO75879 557 aaKnown RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 PIRTP0C851 137 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 PET100P0DJ07 73 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 VEGFAP15692 232 aaPredicted RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 VARSP26640 1264 aaKnown RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 NMBRP28336 390 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 SLC1A2P43004 574 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 EPHB3P54753 998 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 SRSF11Q05519 484 aaKnown RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 LARS2Q15031 903 aaKnown RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 BRINP3Q76B58 766 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 GALNTL5Q7Z4T8 443 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 RANBP3LQ86VV4 465 aaPredicted RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF227Q86WZ6 799 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 CMTR2Q8IYT2 770 aaKnown RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 CRYBG2Q8N1P7 616 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 FATE1Q969F0 183 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF486Q96H40 463 aaPredicted RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 PCDHGB1Q9Y5G3 927 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 SCN9AQ15858 1988 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms