RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 GNAO1P09471 354 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 RPS2P15880 293 aaKnown RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 TGM1P22735 817 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 TNFSF9P41273 254 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 GPM6BQ13491 265 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 SGCAQ16586 387 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 ABHD13Q7L211 337 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 DCAKDQ8WVC6 231 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 DIRAS2Q96HU8 199 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 SNX27Q96L92 541 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 ZNF570Q96NI8 536 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 TSSK3Q96PN8 268 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 ANKHQ9HCJ1 492 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 C14orf105Q9NVL8 296 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 ADGRE2Q9UHX3 823 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 TRHDEQ9UKU6 1024 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 PCDHGA8Q9Y5G5 932 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 GLYATL1P3A0A0U1RQE8 302 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 KANTRA0A1W2PQU2 76 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 MEIS2O14770 477 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 DHFRP00374 187 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 THEGLP0DJG4 465 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 TKTP29401 623 aaKnown RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 GLUD2P49448 558 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 BLKP51451 505 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 GCNT1Q02742 428 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 CSTF1Q05048 431 aaKnown RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 ENPP2Q13822 863 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 DPYSL2Q16555 572 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 Q4G0T1 1027 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 TREML2Q5T2D2 321 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 RFWD3Q6PCD5 774 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 TMEM17Q86X19 198 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 LIN37Q96GY3 246 aaPredicted RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 RPL10LQ96L21 214 aaKnown RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 ERVW-1Q9UQF0 538 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 HTR3EA5X5Y0 456 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 SEC14L5O43304 696 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 PROCP04070 461 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 PKMP14618 531 aaKnown RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 ZNF423Q2M1K9 1284 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 MPP7Q5T2T1 576 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 C6orf183Q5T699 404 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 ANKRD26P1Q6NSI1 321 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 CLNKQ7Z7G1 428 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 RIT1Q92963 219 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 LPIN3Q9BQK8 851 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 ZNF510Q9Y2H8 683 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 TMEM265A0A087WTH1 108 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 SERPINE1P05121 402 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 MMP3P08254 477 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 COX4I1P13073 169 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 TFEBP19484 476 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 AZGP1P25311 298 aaKnown RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 SSTR1P30872 391 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 TTKP33981 857 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 GP5P40197 560 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 TNK2Q07912 1038 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 DYRK1AQ13627 763 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 LDLRAP1Q5SW96 308 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 APOBEC3HQ6NTF7 200 aaKnown RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 KIAA0319LQ8IZA0 1049 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 NKAPQ8N5F7 415 aaKnown RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 SPPL2BQ8TCT7 592 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 SDSLQ96GA7 329 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 PPP3R2Q96LZ3 170 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 TAS2R1Q9NYW7 299 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 FCF1Q9Y324 198 aaKnown RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 RIC1Q4ADV7 1423 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 ATP6AP2A0A1C7CYW4 349 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 SNAP91O60641 907 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 BANF1O75531 89 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 ATP6AP2O75787 350 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 RABGGTBP53611 331 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 SULT2A1Q06520 285 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 MAMLD1Q13495 774 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 RNASEH2BQ5TBB1 312 aaKnown RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 KCNK18Q7Z418 384 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 TMED4Q7Z7H5 227 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 FAM35AQ86V20 835 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 ZNF676Q8N7Q3 588 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 SLC5A5Q92911 643 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 SH3YL1Q96HL8 342 aaPredicted RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 APOLD1Q96LR9 279 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 NUSAP1Q9BXS6 441 aaKnown RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 TMEM88BA6NKF7 163 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 MSCO60682 206 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 OTCP00480 354 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 HNRNPLP14866 589 aaKnown RBP eCLIP9.6□□□□□ -0.87
CHD3-202ENST00000358181 ADARP55265 1226 aaKnown RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 GANABQ14697 944 aaKnown RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 SEC23AQ15436 765 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.6□□□□□ -0.873e-6■■■■□ 25.1
CHD3-202ENST00000358181 CYB5D1Q6P9G0 228 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 SPRYD4Q8WW59 207 aaPredicted RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 SLC32A1Q9H598 525 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 CA5BQ9Y2D0 317 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 CLUHO75153 1309 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 TLR5O60602 858 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 CDC123O75794 336 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms