RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 PLAGL1Q9UM63 463 aa14.47□□□□□ -0.09
CCNE1-202ENST00000357943 GOLGA4Q13439 2230 aaKnown RBP14.46□□□□□ -0.09
CCNE1-202ENST00000357943 CPED1A4D0V7 1026 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 CATP04040 527 aaKnown RBP14.46□□□□□ -0.09
CCNE1-202ENST00000357943 RPN2P04844 631 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 C8GP07360 202 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 TPBGLP0DKB5 382 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 CREB1P16220 341 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 TFEBP19484 476 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 NDUFS1P28331 727 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 ATP6V0D1P61421 351 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 DAB2P98082 770 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 GRB7Q14451 532 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 OR4D1Q15615 310 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 PHKG1Q16816 387 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 PPP1R3AQ16821 1122 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 PIP4P1Q86T03 277 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 OR52E1Q8NGJ3 308 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 NETO1Q8TDF5 533 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 PGM2Q96G03 612 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 TBC1D10AQ9BXI6 508 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 SLC12A9Q9BXP2 914 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 STN1Q9H668 368 aaKnown RBP14.46□□□□□ -0.09
CCNE1-202ENST00000357943 ALG9Q9H6U8 611 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 NMRAL1Q9HBL8 299 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 TMBIM4Q9HC24 238 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 UTP6Q9NYH9 597 aaKnown RBP14.46□□□□□ -0.09
CCNE1-202ENST00000357943 FTSJ1Q9UET6 329 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 PDE10AQ9Y233 779 aa14.46□□□□□ -0.09
CCNE1-202ENST00000357943 RHPN2P1A8MT19 583 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 CASC3O15234 703 aaKnown RBP14.45□□□□□ -0.1
CCNE1-202ENST00000357943 COL6A2P12110 1019 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 CCNFP41002 786 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 MAPK9P45984 424 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 KCNC1P48547 511 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 SP140Q13342 867 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 ACAP2Q15057 778 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 CDHR3Q6ZTQ4 885 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 TMEM26Q6ZUK4 368 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 RBM12BQ8IXT5 1001 aaKnown RBP14.45□□□□□ -0.1
CCNE1-202ENST00000357943 AVL9Q8NBF6 648 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 KIAA1191Q96A73 305 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 CCDC74AQ96AQ1 378 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 SLC38A3Q99624 504 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 MENTQ9BUN1 341 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 PARVBQ9HBI1 364 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 NCKIPSDQ9NZQ3 722 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 POLG2Q9UHN1 485 aa14.45□□□□□ -0.1
CCNE1-202ENST00000357943 GOLGA6L10A6NI86 522 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 SLC16A5O15375 505 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 SYF2O95926 243 aaKnown RBP14.44□□□□□ -0.1
CCNE1-202ENST00000357943 CKMT2P17540 419 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 CYP2A7P20853 494 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 MAP4P27816 1152 aaKnown RBP14.44□□□□□ -0.1
CCNE1-202ENST00000357943 SLC18A2Q05940 514 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 PLCL1Q15111 1095 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 PERM1Q5SV97 790 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 TTC23LQ6PF05 361 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 MBOAT1Q6ZNC8 495 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 ZNF438Q7Z4V0 828 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 ADAMTSL2Q86TH1 951 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 EXOC3L1Q86VI1 746 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 LMNTD1Q8N9Z9 388 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 FBXO15Q8NCQ5 510 aaPredicted RBP14.44□□□□□ -0.1
CCNE1-202ENST00000357943 OR6C4Q8NGE1 309 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 MAGEC3Q8TD91 643 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 RAD51AP1Q96B01 352 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 IL17FQ96PD4 163 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 TFB2MQ9H5Q4 396 aaKnown RBP14.44□□□□□ -0.1
CCNE1-202ENST00000357943 XKR8Q9H6D3 395 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 TMEM216Q9P0N5 145 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 MYO1CO00159 1063 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 TM4SF5O14894 197 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 GUCA1CO95843 209 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 ALDH4A1P30038 563 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 NR1D2Q14995 579 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 TGFBIQ15582 683 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 TSNAXIP1Q2TAA8 658 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 TECRLQ5HYJ1 363 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 C16orf46Q6P387 395 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 KLC3Q6P597 504 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 EFL1Q7Z2Z2 1120 aaKnown RBP14.44□□□□□ -0.1
CCNE1-202ENST00000357943 Q8N9G6 341 aaPredicted RBP14.44□□□□□ -0.1
CCNE1-202ENST00000357943 DEFB124Q8NES8 71 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 STAG3L4Q8TBR4 150 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 IFI44Q8TCB0 444 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 MCOLN3Q8TDD5 553 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 DENND1AQ8TEH3 1009 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 ZFPM2Q8WW38 1151 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 SH3KBP1Q96B97 665 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 ARL8AQ96BM9 186 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 TSNARE1Q96NA8 513 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 ATOH8Q96SQ7 321 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 PKP4Q99569 1192 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.44□□□□□ -0.1
CCNE1-202ENST00000357943 C12orf65Q9H3J6 166 aaKnown RBP14.44□□□□□ -0.1
CCNE1-202ENST00000357943 ACBD3Q9H3P7 528 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 UCK1Q9HA47 277 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 XPR1Q9UBH6 696 aa14.44□□□□□ -0.1
CCNE1-202ENST00000357943 RNF112Q9ULX5 631 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms