RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 FCRL2Q96LA5 508 aaPredicted RBP11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 APOL4Q9BPW4 351 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 ZNF408Q9H9D4 720 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 NT5MQ9NPB1 228 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 MKLN1Q9UL63 735 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 CDH9Q9ULB4 789 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 EVPLLA8MZ36 301 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 MUSKO15146 869 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 SEMG1P04279 462 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 KRT8P05787 483 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 HTR6P50406 440 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 SLC10A7Q0GE19 358 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 SIM2Q14190 667 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 RFTN2Q52LD8 501 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 SPATC1Q76KD6 591 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 GALNT5Q7Z7M9 940 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 CCDC190Q86UF4 302 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 UMODL1-AS1Q8N2C9 162 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 CDYL2Q8N8U2 506 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 OR52B6Q8NGF0 335 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 RNF34Q969K3 372 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 SH3GL1Q99961 368 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 CATSPERZQ9NTU4 200 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 FKBP14Q9NWM8 211 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 RNF6Q9Y252 685 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 U3KQV3 271 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 CAPN5O15484 640 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 SEMA3DO95025 777 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 CD9P21926 228 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 MAXP61244 160 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 RAD51Q06609 339 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 GPR50Q13585 617 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 TBCEQ15813 527 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 RBBP7Q16576 425 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 MLIPQ5VWP3 458 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 SLC46A3Q7Z3Q1 461 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 CCDC103Q8IW40 242 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 CHCHD4Q8N4Q1 142 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 AMER2Q8N7J2 671 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 SMARCD1Q96GM5 515 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 ELP3Q9H9T3 547 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 GMPPBQ9Y5P6 360 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 NLRC5Q86WI3 1866 aa11.86□□□□□ -0.51
SMARCAL1-201ENST00000357276 A0A0U1RQS6 177 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 NPEPPSL1A6NEC2 478 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 E9PAM4 449 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 H3BRB1 525 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 PTGESO14684 152 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 ZW10O43264 779 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 SSX4O60224 188 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 RECQL5O94762 991 aaPredicted RBP11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 SERPINA1P01009 418 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 DARSP14868 501 aaKnown RBP11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 GRK5P34947 590 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 CTSKP43235 329 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 CSNK2BP67870 215 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 PTPRCAPQ14761 206 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 SMU1Q2TAY7 513 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 C10orf111Q8N326 155 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 PGBD5Q8N414 524 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 OR4L1Q8NH43 312 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 RNF170Q96K19 258 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 THUMPD3Q9BV44 507 aaKnown RBP11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 MIR1-1HGQ9H1L0 117 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 TNKS2Q9H2K2 1166 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 AGO3Q9H9G7 860 aaKnown RBP11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 SP110Q9HB58 689 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 TAS2R13Q9NYV9 303 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 CRNNQ9UBG3 495 aaPredicted RBP11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 TRAPPC4Q9Y296 219 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 ARL5AQ9Y689 179 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 GREB1Q4ZG55 1949 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 FAM20BO75063 409 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 FKBP9O95302 570 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 GADD45AP24522 165 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 PSMA3P25788 255 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 EPHA2P29317 976 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 LHX1P48742 406 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 CLK1P49759 484 aaKnown RBP11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 CCDC58Q4VC31 144 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 MFSD4BQ5TF39 518 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 RNF165Q6ZSG1 346 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 C14orf80Q86SX3 495 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 ZNF683Q8IZ20 524 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 RASSF5Q8WWW0 418 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 MED30Q96HR3 178 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 C6orf62Q9GZU0 229 aaPredicted RBP11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 RIBC2Q9H4K1 309 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 TXNRD2Q9NNW7 524 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 PLCXD1Q9NUJ7 323 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 UXTQ9UBK9 157 aaPredicted RBP11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 EIF2B4Q9UI10 523 aaKnown RBP11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 CAB39Q9Y376 341 aaPredicted RBP11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 GRIP1Q9Y3R0 1128 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 POLR3HQ9Y535 204 aaPredicted RBP11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 H3BQ06 376 aaPredicted RBP11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 J3KR12 359 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 PCDHGA12O60330 932 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 OR2B6P58173 313 aa11.85□□□□□ -0.51
SMARCAL1-201ENST00000357276 C19orf57Q0VDD7 668 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms