RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 CDCA2Q69YH5 1023 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 GJB7Q6PEY0 223 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 CARM1Q86X55 608 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 HPS6Q86YV9 775 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 TNS4Q8IZW8 715 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 BRSK1Q8TDC3 778 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 LPGAT1Q92604 370 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 PPP1R16BQ96T49 567 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 PPA2Q9H2U2 334 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 NUDT15Q9NV35 164 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 BORCS7-ASMTA0A0B4J1R7 106 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 A6NHS1 94 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 RFPL1O75677 317 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 DLDP09622 509 aaKnown RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 ETS2P15036 469 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 WDR4P57081 412 aaKnown RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 BOP1Q14137 746 aaKnown RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 MFSD10Q14728 455 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 FAM174BQ3ZCQ3 159 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 OGFRL1Q5TC84 451 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 DCDC5Q6ZRR9 648 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 CREB3L2Q70SY1 520 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 CMASQ8NFW8 434 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 TMEM27Q9HBJ8 222 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 PRAMEF33A0A0G2JMD5 474 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 TLX3O43711 291 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 PRAMEF10O60809 474 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 CD86P42081 329 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 TGFB2P61812 414 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 EFEMP1Q12805 493 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 FNBP1LQ5T0N5 605 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 DUS1LQ6P1R4 473 aaKnown RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 PRSS48Q7RTY5 328 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 RNF180Q86T96 592 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 FAM20CQ8IXL6 584 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 SMAP2Q8WU79 429 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 ABI2Q9NYB9 513 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 MAT2BQ9NZL9 334 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 SLC17A7Q9P2U7 560 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 IRS2Q9Y4H2 1338 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 PRAMEF22A3QJZ6 481 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 E7ESA3 106 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 BNIP3LO60238 219 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF182P17025 639 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 CD6P30203 668 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 VARS2Q5ST30 1063 aaKnown RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 JAZF1Q86VZ6 243 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 PARP8Q8N3A8 854 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 NAT16Q8N8M0 369 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 TBC1D15Q8TC07 691 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 LGR4Q9BXB1 951 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 PRDM12Q9H4Q4 367 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 AKAP11Q9UKA4 1901 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 LCHNA4D1U4 455 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 ARPC2O15144 300 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 LRG1P02750 347 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 MT-ND5P03915 603 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 FOSL1P15407 271 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 IL4RP24394 825 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 CYP4F8P98187 520 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 PPP3CAQ08209 521 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 FAM46CQ5VWP2 391 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 APTXQ7Z2E3 356 aaKnown RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF781Q8N8C0 355 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 MED8Q96G25 268 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 ACOT13Q9NPJ3 140 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 WDR87Q6ZQQ6 2873 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 ACTA2P62736 377 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 ACTG2P63267 376 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 BCL2L1Q07817 233 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 PWP1Q13610 501 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 SLC14A2Q15849 920 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 GNASQ5JWF2 1037 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 C3P1Q6ZMU1 363 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 C17orf64Q86WR6 236 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 UXS1Q8NBZ7 420 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 FAM129BQ96TA1 746 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 GPR22Q99680 433 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 RIOK2Q9BVS4 552 aaKnown RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 COL20A1Q9P218 1284 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 COG5Q9UP83 839 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 PCDHB7Q9Y5E2 793 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 SMCO3A2RU48 225 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 RASGRP1O95267 797 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 PSKH1P11801 424 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 CENPAP49450 140 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 PSD4Q8NDX1 1056 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 FUBP3Q96I24 572 aaKnown RBP eCLIP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 MAU2Q9Y6X3 613 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 FREM1Q5H8C1 2179 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 KLRC2P26717 231 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 PRKCDQ05655 676 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 NFIXQ14938 502 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 Q3C1V9 767 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 XKR4Q5GH76 650 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 SH3D19Q5HYK7 790 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 FAM198BQ6UWH4 519 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 HSDL2Q6YN16 418 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 GALNT6Q8NCL4 622 aa6.45□□□□□ -1.38
VPS13B-202ENST00000357162 OR4C6Q8NH72 309 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms