RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 RALGPS1Q5JS13 557 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 TREML2Q5T2D2 321 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 SLC25A25Q6KCM7 469 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 DRICH1Q6PGQ1 229 aaPredicted RBP6.36□□□□□ -1.39
UPF2-201ENST00000356352 LINGO2Q7L985 606 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 CYP2U1Q7Z449 544 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 ARMC10Q8N2F6 343 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 ZNF615Q8N8J6 731 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 CAMKVQ8NCB2 501 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 CPT1BQ92523 772 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 TP53INP1Q96A56 240 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 SHDQ96IW2 340 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 TBATAQ96M53 351 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 DGAT2Q96PD7 388 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 ATG10Q9H0Y0 220 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 CHRAC1Q9NRG0 131 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 SPATA7Q9P0W8 599 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 P2RX2Q9UBL9 471 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 CD84Q9UIB8 345 aa6.36□□□□□ -1.39
UPF2-201ENST00000356352 MAFBQ9Y5Q3 323 aaPredicted RBP6.36□□□□□ -1.39
UPF2-201ENST00000356352 PRAMEF33A0A0G2JMD5 474 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 PRAMEF10O60809 474 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 TNFP01375 233 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 LINGO3P0C6S8 592 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 CXCR1P25024 350 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 MAP3K8P41279 467 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 FOXM1Q08050 763 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 CRY2Q49AN0 593 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 COLEC12Q5KU26 742 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 SLC8B1Q6J4K2 584 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 ZDHHC21Q8IVQ6 265 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 SLC22A15Q8IZD6 547 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 SIDT2Q8NBJ9 832 aaKnown RBP6.35□□□□□ -1.39
UPF2-201ENST00000356352 GPR151Q8TDV0 419 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 HAPLN3Q96S86 360 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 C12orf4Q9NQ89 552 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 ARHGEF4Q9NR80 690 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 TMA7Q9Y2S6 64 aaKnown RBP6.35□□□□□ -1.39
UPF2-201ENST00000356352 CPQQ9Y646 472 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 ARL5CA6NH57 179 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 CCDC85CA6NKD9 419 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 K7EPI3 171 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 GMFGO60234 142 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 IFNA21P01568 189 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 FAM163BP0C2L3 166 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 COL6A1P12109 1028 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 ZNF12P17014 697 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 HSD11B1P28845 292 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 SLC1A2P43004 574 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 AKR1D1P51857 326 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 SEC13P55735 322 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 MPP1Q00013 466 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 SCARB2Q14108 478 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 ZNF234Q14588 700 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 SGCBQ16585 318 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 IQCCQ4KMZ1 466 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 UBAP2Q5T6F2 1119 aaKnown RBP6.35□□□□□ -1.39
UPF2-201ENST00000356352 ISLR2Q6UXK2 745 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 TAC4Q86UU9 113 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 HDDC3Q8N4P3 179 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 C2orf73Q8N5S3 287 aaPredicted RBP6.35□□□□□ -1.39
UPF2-201ENST00000356352 ZSCAN4Q8NAM6 433 aaPredicted RBP6.35□□□□□ -1.39
UPF2-201ENST00000356352 GLIS3Q8NEA6 775 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 RAB2BQ8WUD1 216 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 PPP1R13LQ8WUF5 828 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 ACDQ96AP0 544 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 RGMAQ96B86 450 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 KREMEN1Q96MU8 473 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 CYP2S1Q96SQ9 504 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 CIB1Q99828 191 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 KXD1Q9BQD3 176 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 TMEM175Q9BSA9 504 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 ZSCAN5AQ9BUG6 496 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 TBL1XR1Q9BZK7 514 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 POLR3BQ9NW08 1133 aaPredicted RBP6.35□□□□□ -1.39
UPF2-201ENST00000356352 LYARQ9NX58 379 aaKnown RBP6.35□□□□□ -1.39
UPF2-201ENST00000356352 C19orf25Q9UFG5 118 aaPredicted RBP6.35□□□□□ -1.39
UPF2-201ENST00000356352 GLS2Q9UI32 602 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 TLR6Q9Y2C9 796 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 FCF1Q9Y324 198 aaKnown RBP6.35□□□□□ -1.39
UPF2-201ENST00000356352 TIMM22Q9Y584 194 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 PCDHB11Q9Y5F2 797 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 SPATA31D1Q6ZQQ2 1576 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 A0A1W2PQ45 241 aaPredicted RBP6.35□□□□□ -1.39
UPF2-201ENST00000356352 A0A1W2PQY0 241 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 ZNF99A8MXY4 864 aaPredicted RBP6.35□□□□□ -1.39
UPF2-201ENST00000356352 PPEF2O14830 753 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 TPD52L2O43399 206 aaKnown RBP6.35□□□□□ -1.39
UPF2-201ENST00000356352 DNAJB1P25685 340 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 SLC7A1P30825 629 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 ECT2LQ008S8 904 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 GXYLT1Q4G148 440 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 PDCD4Q53EL6 469 aaKnown RBP6.35□□□□□ -1.39
UPF2-201ENST00000356352 RBM48Q5RL73 367 aaKnown RBP6.35□□□□□ -1.39
UPF2-201ENST00000356352 RFWD3Q6PCD5 774 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 OLFML1Q6UWY5 402 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 HID1Q8IV36 788 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 LRRN4CLQ8ND94 238 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 TSTD1Q8NFU3 115 aa6.35□□□□□ -1.39
UPF2-201ENST00000356352 WDR26Q9H7D7 661 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms