RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 CSMD2Q7Z408 3487 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 GSAPA4D1B5 854 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 CFAP73A6NFT4 308 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 E7EQ34 232 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 NDUFAB1O14561 156 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 MATN3O15232 486 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 RARAP10276 462 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 MTHFD1P11586 935 aaKnown RBP10.86□□□□□ -0.67
RTN3-204ENST00000354497 HLA-DPA1P20036 260 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 TMEM115Q12893 351 aaPredicted RBP10.86□□□□□ -0.67
RTN3-204ENST00000354497 PRKAA1Q13131 559 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 ART3Q13508 389 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 KRT33BQ14525 404 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 SLC9A5Q14940 896 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 KRTAP21-3Q3LHN1 58 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 C1orf189Q5VU69 101 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 PDPK2PQ6A1A2 396 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 FAM180AQ6UWF9 173 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 FAM83HQ6ZRV2 1179 aaPredicted RBP10.86□□□□□ -0.67
RTN3-204ENST00000354497 C11orf96Q7Z7L8 435 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 AMZ2Q86W34 360 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 DNAJB14Q8TBM8 379 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 FAR1Q8WVX9 515 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 EID2BQ96D98 161 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 MAGEB10Q96LZ2 347 aaPredicted RBP10.86□□□□□ -0.67
RTN3-204ENST00000354497 DHRS4Q9BTZ2 278 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 KLHL25Q9H0H3 589 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 BPIFA1Q9NP55 256 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 ATP13A2Q9NQ11 1180 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 P4HTMQ9NXG6 502 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 QPCTLQ9NXS2 382 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 SUCOQ9UBS9 1254 aaKnown RBP10.86□□□□□ -0.67
RTN3-204ENST00000354497 NDOR1Q9UHB4 597 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 SERTAD3Q9UJW9 196 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 BTRCQ9Y297 605 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 TMED5Q9Y3A6 229 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 ZNF711Q9Y462 761 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 ADGRG4Q8IZF6 3080 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 PDZD2O15018 2839 aa10.86□□□□□ -0.67
RTN3-204ENST00000354497 ZNF749O43361 778 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 ALOX12BO75342 701 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 POP7O75817 140 aaKnown RBP10.85□□□□□ -0.67
RTN3-204ENST00000354497 ATP1A3P13637 1013 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 HTR1EP28566 365 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 ALDH3A1P30838 453 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 FOXL2P58012 376 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 DCDC1P59894 354 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 NFE2L1Q14494 772 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 SSPNQ14714 243 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 ZNF169Q14929 603 aaPredicted RBP10.85□□□□□ -0.67
RTN3-204ENST00000354497 KRT31Q15323 416 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 PCSK7Q16549 785 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 BOLA3Q53S33 107 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 VWA2Q5GFL6 755 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 IRAK1BP1Q5VVH5 260 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 ALG1LQ6GMV1 187 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 PPP1R2P3Q6NXS1 205 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 CPLX3Q8WVH0 158 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 MAML1Q92585 1016 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 POM121Q96HA1 1249 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 C12orf66Q96MD2 445 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 NAP1L3Q99457 506 aaPredicted RBP10.85□□□□□ -0.67
RTN3-204ENST00000354497 WWP1Q9H0M0 922 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.85□□□□□ -0.67
RTN3-204ENST00000354497 KLF2Q9Y5W3 355 aaPredicted RBP10.85□□□□□ -0.67
RTN3-204ENST00000354497 SCINQ9Y6U3 715 aa10.85□□□□□ -0.67
RTN3-204ENST00000354497 TRGV8A0A0C4DH27 118 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 A0A1W2PQJ5 194 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 RCCD1A6NED2 376 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 OR2AG2A6NM03 316 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 JRKO75564 520 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 STSP08842 583 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 HBQ1P09105 142 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 CBSLP0DN79 551 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 BPIP17213 487 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 CBSP35520 551 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 PCK1P35558 622 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 GJC1P36383 396 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 HADHAP40939 763 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 TSFMP43897 325 aaKnown RBP10.84□□□□□ -0.67
RTN3-204ENST00000354497 KCNK10P57789 538 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 GALNT2Q10471 571 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 KIF5AQ12840 1032 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 MPP3Q13368 585 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 IFI16Q16666 785 aaKnown RBP10.84□□□□□ -0.67
RTN3-204ENST00000354497 ATP13A5Q4VNC0 1218 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 SH2D4BQ5SQS7 431 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 FAM182AQ5T1J6 154 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 ZFYVE27Q5T4F4 411 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 TXNRD3NBQ6F5E7 133 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 TMEM220Q6QAJ8 160 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 LRRC49Q8IUZ0 686 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 CCNYQ8ND76 341 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 OR4E2Q8NGC2 313 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 PPP4R1Q8TF05 950 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 ITLN2Q8WWU7 325 aaPredicted RBP10.84□□□□□ -0.67
RTN3-204ENST00000354497 INSM2Q96T92 566 aaPredicted RBP10.84□□□□□ -0.67
RTN3-204ENST00000354497 C17orf62Q9BQA9 187 aa10.84□□□□□ -0.67
RTN3-204ENST00000354497 DPH2Q9BQC3 489 aaPredicted RBP10.84□□□□□ -0.67
RTN3-204ENST00000354497 CHST11Q9NPF2 352 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms