RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 COL4A1P02462 1669 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 PIPSLA2A3N6 862 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 AP3D1O14617 1153 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 SOCS5O75159 536 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 TCEA3O75764 348 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 RPL4P36578 427 aaKnown RBP13.43□□□□□ -0.26
SMC6-201ENST00000351948 MTAPQ13126 283 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 DSC3Q14574 896 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 TNFAIP8L2Q6P589 184 aaPredicted RBP13.43□□□□□ -0.26
SMC6-201ENST00000351948 TRIM69Q86WT6 500 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 ADGRG2Q8IZP9 1017 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 POMGNT2Q8NAT1 580 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 ZNF641Q96N77 438 aaPredicted RBP13.43□□□□□ -0.26
SMC6-201ENST00000351948 SLC22A12Q96S37 553 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 APOL4Q9BPW4 351 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 YIPF4Q9BSR8 244 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 CTPS2Q9NRF8 586 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 SEMA3GQ9NS98 782 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 CDH22Q9UJ99 828 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 EME2A4GXA9 379 aaPredicted RBP13.42□□□□□ -0.26
SMC6-201ENST00000351948 ZNF487B1APH4 448 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 ERI3O43414 337 aaKnown RBP13.42□□□□□ -0.26
SMC6-201ENST00000351948 PCDH7O60245 1069 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 GJB3O75712 270 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 CD68P34810 354 aaPredicted RBP13.42□□□□□ -0.26
SMC6-201ENST00000351948 GRIA2P42262 883 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 SRSF11Q05519 484 aaKnown RBP13.42□□□□□ -0.26
SMC6-201ENST00000351948 TGFBIQ15582 683 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 ALKBH2Q6NS38 261 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 AGTRAPQ6RW13 159 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 DPP10Q8N608 796 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 OR9I1Q8NGQ6 314 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 CENPIQ92674 756 aaPredicted RBP13.42□□□□□ -0.26
SMC6-201ENST00000351948 DNASE1L2Q92874 299 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 AKTIPQ9H8T0 292 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 OR1A2Q9Y585 309 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 NDUFS4O43181 175 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 TNFP01375 233 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 CPN2P22792 545 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 DGKQP52824 942 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 NDUFA9Q16795 377 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 EIF3MQ7L2H7 374 aaKnown RBP13.42□□□□□ -0.26
SMC6-201ENST00000351948 THOC6Q86W42 341 aaKnown RBP13.42□□□□□ -0.26
SMC6-201ENST00000351948 COMMD2Q86X83 199 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 PARP8Q8N3A8 854 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 OR51B5Q9H339 312 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.42□□□□□ -0.26
SMC6-201ENST00000351948 A8MUA0 341 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 TMEM189-UBE2V1I3L0A0 370 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 SRCP12931 536 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 ZNF37AP17032 561 aaPredicted RBP13.42□□□□□ -0.26
SMC6-201ENST00000351948 BNIP2Q12982 314 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 LAPTM5Q13571 262 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 NCF4Q15080 339 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 ZNF605Q86T29 641 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 LUZP2Q86TE4 346 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 C1orf52Q8N6N3 182 aaKnown RBP13.42□□□□□ -0.26
SMC6-201ENST00000351948 ATP6V1C2Q8NEY4 427 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 SLC47A1Q96FL8 570 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 PRICKLE1Q96MT3 831 aaPredicted RBP13.42□□□□□ -0.26
SMC6-201ENST00000351948 ZNF607Q96SK3 696 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 OSBPL7Q9BZF2 842 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 ALG2Q9H553 416 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 SLC32A1Q9H598 525 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 ADAP2Q9NPF8 381 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 MARCH5Q9NX47 278 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 CXXC1Q9P0U4 656 aaPredicted RBP13.42□□□□□ -0.26
SMC6-201ENST00000351948 RNF11Q9Y3C5 154 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 GSTA3Q16772 222 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 HIC2Q96JB3 615 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 TMEM245Q9H330 911 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 CORO2BQ9UQ03 480 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 AP3M1Q9Y2T2 418 aa13.42□□□□□ -0.26
SMC6-201ENST00000351948 TPST2O60704 377 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 CTGFP29279 349 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 CCNFP41002 786 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 CDKN1CP49918 316 aaPredicted RBP13.41□□□□□ -0.26
SMC6-201ENST00000351948 RPL6Q02878 288 aaKnown RBP13.41□□□□□ -0.26
SMC6-201ENST00000351948 CDHR3Q6ZTQ4 885 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 GALNT5Q7Z7M9 940 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 OR5AK3PQ8NH89 298 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 NCSTNQ92542 709 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 CIB1Q99828 191 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 DCUN1D5Q9BTE7 237 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 MAGEE1Q9HCI5 957 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 MAST2Q6P0Q8 1798 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 THSD7AQ9UPZ6 1657 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 LRRC14BA6NHZ5 514 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 ALDOAP04075 364 aaKnown RBP13.41□□□□□ -0.26
SMC6-201ENST00000351948 KLK1P06870 262 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 RPL26P61254 145 aaKnown RBP13.41□□□□□ -0.26
SMC6-201ENST00000351948 METTL21CQ5VZV1 264 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 EPHX4Q8IUS5 362 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 CEP97Q8IW35 865 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 GLYATL1Q969I3 302 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 NSUN5Q96P11 429 aaKnown RBP13.41□□□□□ -0.26
SMC6-201ENST00000351948 HOPXQ9BPY8 73 aaPredicted RBP13.41□□□□□ -0.26
SMC6-201ENST00000351948 SPATA5L1Q9BVQ7 753 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 BOCQ9BWV1 1114 aa13.41□□□□□ -0.26
SMC6-201ENST00000351948 KATNBL1Q9H079 304 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms