RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 GSNP06396 782 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 MRPS22P82650 360 aaKnown RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 ZNF678Q5SXM1 525 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 SCIMPQ6UWF3 145 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 MMAAQ8IVH4 418 aaKnown RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 SLC30A8Q8IWU4 369 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 SPPL2AQ8TCT8 520 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 P2RY13Q9BPV8 354 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 REEP1Q9H902 201 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 EBF2Q9HAK2 575 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 SCML1Q9UN30 329 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 DHRS12A0PJE2 317 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 SCELO95171 688 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 PGM3O95394 542 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 GPIP06744 558 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 ATP6V1E1P36543 226 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 RALGDSQ12967 914 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 OLIG2Q13516 323 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 TTC23Q5W5X9 447 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 CLEC6AQ6EIG7 209 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 DPY19L3Q6ZPD9 716 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 NEK10Q6ZWH5 1172 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 DHRSXQ8N5I4 330 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 GALNT6Q8NCL4 622 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 SCRN2Q96FV2 425 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 SEPHS2Q99611 448 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 CXCL16Q9H2A7 254 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 CLEC4MQ9H2X3 399 aaPredicted RBP11.92□□□□□ -0.5
SMAD9-201ENST00000350148 C3orf14Q9HBI5 128 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 PCDH12Q9NPG4 1184 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 ZNF358Q9NW07 568 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 TIMM22Q9Y584 194 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 MATN2O00339 956 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 ABCB1P08183 1280 aaPredicted RBP11.92□□□□□ -0.5
SMAD9-201ENST00000350148 CD1DP15813 335 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 NDUFA9Q16795 377 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 LRRC26Q2I0M4 334 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 TIGD2Q4W5G0 525 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 FAAH2Q6GMR7 532 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 ZNF382Q96SR6 550 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 FANCEQ9HB96 536 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 RPS6KB2Q9UBS0 482 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 SPEF1Q9Y4P9 236 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 IMPDH2P12268 514 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 TJAP1Q5JTD0 557 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 ATG16L2Q8NAA4 619 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 DNAJB14Q8TBM8 379 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 HCAR2Q8TDS4 363 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 TADA1Q96BN2 335 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 MAGED4Q96JG8 741 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 APOLD1Q96LR9 279 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 ACSL5Q9ULC5 683 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 OARD1Q9Y530 152 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 GRIA3P42263 894 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 STXBP1P61764 594 aaKnown RBP11.92□□□□□ -0.5
SMAD9-201ENST00000350148 TEAD4Q15561 434 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 ZNHIT3Q15649 155 aaPredicted RBP11.92□□□□□ -0.5
SMAD9-201ENST00000350148 CYP2R1Q6VVX0 501 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 CDK20Q8IZL9 346 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 EBF3Q9H4W6 596 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 EPS8L2Q9H6S3 715 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 S100A14Q9HCY8 104 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 TRPS1Q9UHF7 1281 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 CDH7Q9ULB5 785 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 ZNF232Q9UNY5 417 aa11.92□□□□□ -0.5
SMAD9-201ENST00000350148 SAC3D1A6NKF1 404 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 LEFTY1O75610 366 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 SOX11P35716 441 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 RUNX3Q13761 415 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 DNAJC14Q6Y2X3 702 aaPredicted RBP11.91□□□□□ -0.5
SMAD9-201ENST00000350148 CYP4Z2PQ8N1L4 340 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 EFCAB3Q8N7B9 438 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 OR2T12Q8NG77 320 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 NPAS2Q99743 824 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 IL37Q9NZH6 218 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 ZNF780BQ9Y6R6 833 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 COMMD3-BMI1R4GMX3 469 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 AXIN1O15169 862 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 ZSCAN9O15535 394 aaPredicted RBP11.91□□□□□ -0.5
SMAD9-201ENST00000350148 ITM2AO43736 263 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 TULP3O75386 442 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 F11P03951 625 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 CHRNGP07510 517 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 SRCP12931 536 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 SEC13P55735 322 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 RPS14P62263 151 aaKnown RBP11.91□□□□□ -0.5
SMAD9-201ENST00000350148 GRIK2Q13002 908 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 MRPL48Q96GC5 212 aaKnown RBP11.91□□□□□ -0.5
SMAD9-201ENST00000350148 SMG9Q9H0W8 520 aaKnown RBP11.91□□□□□ -0.5
SMAD9-201ENST00000350148 EPB41L4BQ9H329 900 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 TMEM45AQ9NWC5 275 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 OBP2AQ9NY56 170 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 PNMA8BQ9ULN7 279 aaPredicted RBP11.91□□□□□ -0.5
SMAD9-201ENST00000350148 MAN2B1O00754 1011 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 SERPINB7O75635 380 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 ZMPSTE24O75844 475 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 ARHGEF15O94989 841 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 IGLV3-25P01717 112 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 SLC35E2BP0CK96 405 aa11.91□□□□□ -0.5
SMAD9-201ENST00000350148 SSR2P43308 183 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms