RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 MSS51Q4VC12 460 aa18.27■□□□□ 0.52
UBE3C-201ENST00000348165 TNFAIP8L2Q6P589 184 aaPredicted RBP18.27■□□□□ 0.52
UBE3C-201ENST00000348165 BRAT1Q6PJG6 821 aa18.27■□□□□ 0.52
UBE3C-201ENST00000348165 CXXC5Q7LFL8 322 aaKnown RBP18.27■□□□□ 0.52
UBE3C-201ENST00000348165 SLC38A4Q969I6 547 aa18.27■□□□□ 0.52
UBE3C-201ENST00000348165 PEBP4Q96S96 227 aa18.27■□□□□ 0.52
UBE3C-201ENST00000348165 TMEM209Q96SK2 561 aa18.27■□□□□ 0.52
UBE3C-201ENST00000348165 CADM1Q9BY67 442 aaKnown RBP18.27■□□□□ 0.52
UBE3C-201ENST00000348165 UGT2B11O75310 529 aa18.27■□□□□ 0.51
UBE3C-201ENST00000348165 SCELO95171 688 aa18.27■□□□□ 0.51
UBE3C-201ENST00000348165 TGFB1P01137 390 aa18.27■□□□□ 0.51
UBE3C-201ENST00000348165 HOXB6P17509 224 aaKnown RBP18.27■□□□□ 0.51
UBE3C-201ENST00000348165 LY6G5CQ5SRR4 150 aa18.27■□□□□ 0.51
UBE3C-201ENST00000348165 SLC9A4Q6AI14 798 aa18.27■□□□□ 0.51
UBE3C-201ENST00000348165 AHI1Q8N157 1196 aa18.27■□□□□ 0.51
UBE3C-201ENST00000348165 LRTOMTQ8WZ04 291 aa18.27■□□□□ 0.51
UBE3C-201ENST00000348165 NARS2Q96I59 477 aaKnown RBP18.27■□□□□ 0.51
UBE3C-201ENST00000348165 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.27■□□□□ 0.51
UBE3C-201ENST00000348165 FADS2P1A8MWK0 482 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 GALTP07902 379 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 XIAPP98170 497 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 CREB5Q02930 508 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 FAM91A1Q658Y4 838 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 POF1BQ8WVV4 589 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 S100ZQ8WXG8 99 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 RBM4BQ9BQ04 359 aaKnown RBP18.26■□□□□ 0.51
UBE3C-201ENST00000348165 DUSP26Q9BV47 211 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 RBM4Q9BWF3 364 aaKnown RBP18.26■□□□□ 0.51
UBE3C-201ENST00000348165 OXSMQ9NWU1 459 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 BCKDKO14874 412 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 SEMA3DO95025 777 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 CLCNKAP51800 687 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 PAFAH1B3Q15102 231 aaKnown RBP18.26■□□□□ 0.51
UBE3C-201ENST00000348165 TEAD4Q15561 434 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 RBM20Q5T481 1227 aaKnown RBP18.26■□□□□ 0.51
UBE3C-201ENST00000348165 PRICKLE1Q96MT3 831 aaPredicted RBP18.26■□□□□ 0.51
UBE3C-201ENST00000348165 ADAP2Q9NPF8 381 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 CTPS2Q9NRF8 586 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 ITGAXP20702 1163 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 CD247P20963 164 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 NFKB2Q00653 900 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 GALNT2Q10471 571 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 SLBPQ14493 270 aaKnown RBP eCLIP18.26■□□□□ 0.51
UBE3C-201ENST00000348165 AKAP14Q86UN6 197 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 PIWIL1Q96J94 861 aaKnown RBP18.26■□□□□ 0.51
UBE3C-201ENST00000348165 BCL2L14Q9BZR8 327 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 SIRPGQ9P1W8 387 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 RBMX2Q9Y388 322 aaKnown RBP18.26■□□□□ 0.51
UBE3C-201ENST00000348165 TELO2Q9Y4R8 837 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 A8MT66 165 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 ITM2AO43736 263 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 HCN1O60741 890 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 MMP20O60882 483 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 SOD2P04179 222 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 THRBP10828 461 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 CCNFP41002 786 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 PGDP52209 483 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 PEX5LQ8IYB4 626 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 PQLC3Q8N755 202 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 DDX1Q92499 740 aaKnown RBP18.26■□□□□ 0.51
UBE3C-201ENST00000348165 ROPN1LQ96C74 230 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 EBF3Q9H4W6 596 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 TAS2R1Q9NYW7 299 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 IQCMA0A1B0GVH7 501 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 ZNF846Q147U1 533 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 KHDC1Q4VXA5 237 aaKnown RBP18.26■□□□□ 0.51
UBE3C-201ENST00000348165 ZC3HC1Q86WB0 502 aaKnown RBP18.26■□□□□ 0.51
UBE3C-201ENST00000348165 FBXO15Q8NCQ5 510 aaPredicted RBP18.26■□□□□ 0.51
UBE3C-201ENST00000348165 COX4I2Q96KJ9 171 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 XYLT2Q9H1B5 865 aa18.26■□□□□ 0.51
UBE3C-201ENST00000348165 PCDH7O60245 1069 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 SHOX2O60902 331 aaPredicted RBP18.25■□□□□ 0.51
UBE3C-201ENST00000348165 RPL10P27635 214 aaKnown RBP18.25■□□□□ 0.51
UBE3C-201ENST00000348165 PRDX6P30041 224 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 RPS9P46781 194 aaKnown RBP18.25■□□□□ 0.51
UBE3C-201ENST00000348165 PSMD4P55036 377 aaKnown RBP18.25■□□□□ 0.51
UBE3C-201ENST00000348165 TMEM214Q6NUQ4 689 aaKnown RBP18.25■□□□□ 0.51
UBE3C-201ENST00000348165 ZNF572Q7Z3I7 529 aaPredicted RBP18.25■□□□□ 0.51
UBE3C-201ENST00000348165 THAP5Q7Z6K1 395 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 GTPBP3Q969Y2 492 aaKnown RBP18.25■□□□□ 0.51
UBE3C-201ENST00000348165 CDADC1Q9BWV3 514 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 MUC13Q9H3R2 512 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 FBXL12Q9NXK8 326 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 SMPD3Q9NY59 655 aaPredicted RBP18.25■□□□□ 0.51
UBE3C-201ENST00000348165 PPM1HQ9ULR3 514 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 FAM159BA6NKW6 160 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 CDC7O00311 574 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 PTPRCAPQ14761 206 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 PYDC2Q56P42 97 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 C14orf80Q86SX3 495 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 TMC8Q8IU68 726 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 TTC29Q8NA56 475 aaPredicted RBP18.25■□□□□ 0.51
UBE3C-201ENST00000348165 SLC22A14Q9Y267 594 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 CXCR6O00574 342 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 NADKO95544 446 aaPredicted RBP18.25■□□□□ 0.51
UBE3C-201ENST00000348165 ALDH4A1P30038 563 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 GPX6P59796 221 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 BNC1Q01954 994 aa18.25■□□□□ 0.51
UBE3C-201ENST00000348165 SOX4Q06945 474 aaPredicted RBP18.25■□□□□ 0.51
UBE3C-201ENST00000348165 TMEM145Q8NBT3 493 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms