RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 OR10A6Q8NH74 314 aa15.1■□□□□ 0.01
UPF3B-202ENST00000345865 ULK4Q96C45 1275 aa15.1■□□□□ 0.01
UPF3B-202ENST00000345865 HAUS8Q9BT25 410 aa15.1■□□□□ 0.01
UPF3B-202ENST00000345865 DPY30Q9C005 99 aa15.1■□□□□ 0.01
UPF3B-202ENST00000345865 CLMPQ9H6B4 373 aa15.1■□□□□ 0.01
UPF3B-202ENST00000345865 MAFFQ9ULX9 164 aa15.1■□□□□ 0.01
UPF3B-202ENST00000345865 SLC8A2Q9UPR5 921 aa15.1■□□□□ 0.01
UPF3B-202ENST00000345865 MAGED1Q9Y5V3 778 aaPredicted RBP15.1■□□□□ 0.01
UPF3B-202ENST00000345865 HELZP42694 1942 aaKnown RBP15.09■□□□□ 0.01
UPF3B-202ENST00000345865 PRAMEF4O60810 478 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 PDYNP01213 254 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 ANXA5P08758 320 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 ACRP10323 421 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 CTSAP10619 480 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 BCKDHAP12694 445 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 CDH1P12830 882 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 AOAHP28039 575 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 RPS9P46781 194 aaKnown RBP15.09■□□□□ 0.01
UPF3B-202ENST00000345865 PTPN5P54829 565 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 NKG7Q16617 165 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 MAPKAPK3Q16644 382 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 PRAMEF9Q5VWM5 478 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 TMEM214Q6NUQ4 689 aaKnown RBP15.09■□□□□ 0.01
UPF3B-202ENST00000345865 HM13Q8TCT9 377 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 PYCR2Q96C36 320 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 TCEAL4Q96EI5 215 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 SLC32A1Q9H598 525 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 DLGAP4Q9Y2H0 992 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 H0Y858 1186 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 CCL16O15467 120 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 CLDN9O95484 217 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 B3GALT4O96024 378 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 LINC00271P0C7V0 271 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 CBSLP0DN79 551 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 TCF3P15923 654 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 CBSP35520 551 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 SPINT3P49223 89 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 NEK2P51955 445 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 GBX1Q14549 363 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 IMPG1Q17R60 797 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 CARD16Q5EG05 197 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 METTL2BQ6P1Q9 378 aaKnown RBP15.09■□□□□ 0.01
UPF3B-202ENST00000345865 UBE2R2Q712K3 238 aaPredicted RBP15.09■□□□□ 0.01
UPF3B-202ENST00000345865 C10orf111Q8N326 155 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 ZNF548Q8NEK5 533 aaPredicted RBP15.09■□□□□ 0.01
UPF3B-202ENST00000345865 BEGAINQ9BUH8 593 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 CPEB1Q9BZB8 566 aaKnown RBP15.09■□□□□ 0.01
UPF3B-202ENST00000345865 C1orf109Q9NX04 203 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 SMPD3Q9NY59 655 aaPredicted RBP15.09■□□□□ 0.01
UPF3B-202ENST00000345865 UTS2RQ9UKP6 389 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 FADS3Q9Y5Q0 445 aa15.09■□□□□ 0.01
UPF3B-202ENST00000345865 TRIM64A6NGJ6 449 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 CLOCKO15516 846 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 ANXA6P08133 673 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 NFKBIAP25963 317 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 SMU1Q2TAY7 513 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 OTUD3Q5T2D3 398 aaPredicted RBP15.08■□□□□ 0
UPF3B-202ENST00000345865 NEK5Q6P3R8 708 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 TTC33Q6PID6 262 aaPredicted RBP15.08■□□□□ 0
UPF3B-202ENST00000345865 ENPP6Q6UWR7 440 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 EP400NLQ6ZTU2 488 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 OR2T12Q8NG77 320 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 ITFG1Q8TB96 612 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 FIG4Q92562 907 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 SCAMP4Q969E2 229 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 YME1L1Q96TA2 773 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 THUMPD3Q9BV44 507 aaKnown RBP15.08■□□□□ 0
UPF3B-202ENST00000345865 SLC12A9Q9BXP2 914 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 ACTR8Q9H981 624 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 DDX18Q9NVP1 670 aaKnown RBP15.08■□□□□ 0
UPF3B-202ENST00000345865 MYO7AQ13402 2215 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 NUP214P35658 2090 aaPredicted RBP15.08■□□□□ 0
UPF3B-202ENST00000345865 KCNE1BA0A087WTH5 132 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 TRIM64CA6NLI5 447 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 NEDD8-MDP1E9PL57 170 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 PRSS23O95084 383 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 C7P10643 843 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 TACR1P25103 407 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 AKT1P31749 480 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 TUBA4AP68366 448 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 CYP4F3Q08477 520 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 MAD2L1Q13257 205 aaPredicted RBP15.08■□□□□ 0
UPF3B-202ENST00000345865 KCTD21Q4G0X4 260 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 CACHD1Q5VU97 1274 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 TMEM215Q68D42 235 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 PHACTR4Q8IZ21 702 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 SLC22A15Q8IZD6 547 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 KREMEN2Q8NCW0 462 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 OSCP1Q8WVF1 389 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 ASB11Q8WXH4 323 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 ZBTB18Q99592 522 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 P2RY13Q9BPV8 354 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 ASIC5Q9NY37 505 aa15.08■□□□□ 0
UPF3B-202ENST00000345865 TRBV5-3A0A0A0MS03 114 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 BMP10O95393 424 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 POP4O95707 220 aaKnown RBP15.07■□□□□ 0
UPF3B-202ENST00000345865 IL6P05231 212 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 CAPGP40121 348 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 RUNDC3AQ59EK9 446 aa15.07■□□□□ 0
UPF3B-202ENST00000345865 USP51Q70EK9 711 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms