RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 RPN2P04844 631 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 WT1P19544 449 aaPredicted RBP19.21■□□□□ 0.67
CLTA-202ENST00000345519 MAP4P27816 1152 aaKnown RBP19.21■□□□□ 0.67
CLTA-202ENST00000345519 PKLRP30613 574 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 ATP1A2P50993 1020 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 ACY1Q03154 408 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 DHX9Q08211 1270 aaKnown RBP19.21■□□□□ 0.67
CLTA-202ENST00000345519 ABHD18Q0P651 414 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 MANEAQ5SRI9 462 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 NUP210LQ5VU65 1888 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 ZNF572Q7Z3I7 529 aaPredicted RBP19.21■□□□□ 0.67
CLTA-202ENST00000345519 GALNT7Q86SF2 657 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 PPP1R3BQ86XI6 285 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 CNTN4Q8IWV2 1026 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 NLGN4XQ8N0W4 816 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 SIDT2Q8NBJ9 832 aaKnown RBP19.21■□□□□ 0.67
CLTA-202ENST00000345519 NLGN4YQ8NFZ3 816 aaPredicted RBP19.21■□□□□ 0.67
CLTA-202ENST00000345519 CALML6Q8TD86 181 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 TTC9Q92623 222 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 WBP1Q96G27 269 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 PPM1MQ96MI6 270 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 BBC3Q96PG8 261 aaPredicted RBP19.21■□□□□ 0.67
CLTA-202ENST00000345519 EBNA1BP2Q99848 306 aaKnown RBP19.21■□□□□ 0.67
CLTA-202ENST00000345519 WDR83Q9BRX9 315 aaKnown RBP19.21■□□□□ 0.67
CLTA-202ENST00000345519 SYTL2Q9HCH5 934 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 PCDHGA4Q9Y5G9 962 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 ANKRD12Q6UB98 2062 aa19.21■□□□□ 0.67
CLTA-202ENST00000345519 COL6A6A6NMZ7 2263 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 ERVH48-1M5A8F1 160 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 TERTO14746 1132 aaKnown RBP19.2■□□□□ 0.66
CLTA-202ENST00000345519 TTI1O43156 1089 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 KDM1AO60341 852 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 EBLN1P0CF75 366 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 ZNF28P17035 718 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 ITGB6P18564 788 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 STAT5AP42229 794 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 SLC1A2P43004 574 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 RAB28P51157 221 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 CLCN7P51798 805 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 TUBB4BP68371 445 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 RHDQ02161 417 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 PRKG2Q13237 762 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 TUBB3Q13509 450 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 TUBB2AQ13885 445 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 FRG1Q14331 258 aaKnown RBP19.2■□□□□ 0.66
CLTA-202ENST00000345519 ARHGAP40Q5TG30 622 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 ARMC6Q6NXE6 501 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 SPESP1Q6UW49 350 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 UNC5AQ6ZN44 842 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 OTOAQ7RTW8 1153 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 DENND6AQ8IWF6 608 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 KLHL7Q8IXQ5 586 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 CACNA2D3Q8IZS8 1091 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.2■□□□□ 0.66
CLTA-202ENST00000345519 OR8K5Q8NH50 307 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 KCNJ9Q92806 393 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 ZNF501Q96CX3 271 aaPredicted RBP19.2■□□□□ 0.66
CLTA-202ENST00000345519 LRRC39Q96DD0 335 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 OR2A14Q96R47 310 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 TRIM51Q9BSJ1 452 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 TUBB2BQ9BVA1 445 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 FGF21Q9NSA1 209 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 ACTR10Q9NZ32 417 aa19.2■□□□□ 0.66
CLTA-202ENST00000345519 PIPSLA2A3N6 862 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 E7ESA3 106 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 ATXN7O15265 892 aaPredicted RBP19.19■□□□□ 0.66
CLTA-202ENST00000345519 NIPSNAP2O75323 286 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 SPAG6O75602 509 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 TIAF1O95411 115 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 CHRM5P08912 532 aaPredicted RBP19.19■□□□□ 0.66
CLTA-202ENST00000345519 PKMP14618 531 aaKnown RBP19.19■□□□□ 0.66
CLTA-202ENST00000345519 PEBP1P30086 187 aaKnown RBP19.19■□□□□ 0.66
CLTA-202ENST00000345519 FOXM1Q08050 763 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 KCNAB1Q14722 419 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 CRTC2Q53ET0 693 aaPredicted RBP19.19■□□□□ 0.66
CLTA-202ENST00000345519 SOWAHCQ53LP3 525 aaPredicted RBP19.19■□□□□ 0.66
CLTA-202ENST00000345519 KIAA1614Q5VZ46 1190 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 STEAP4Q687X5 459 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 ZNF549Q6P9A3 640 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 ZNF517Q6ZMY9 492 aaPredicted RBP19.19■□□□□ 0.66
CLTA-202ENST00000345519 VASH2Q86V25 355 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 RASGRP3Q8IV61 690 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 C17orf53Q8N3J3 647 aaPredicted RBP19.19■□□□□ 0.66
CLTA-202ENST00000345519 LINC01555Q8NAE3 123 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 SPATA4Q8NEY3 305 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 HMGCLL1Q8TB92 370 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 SNF8Q96H20 258 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 TRAPPC9Q96Q05 1148 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 FAM167BQ9BTA0 163 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 XKR8Q9H6D3 395 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 PDE7BQ9NP56 450 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 CRYL1Q9Y2S2 319 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 MRFAP1Q9Y605 127 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 COMMD10Q9Y6G5 202 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 TEX264Q9Y6I9 313 aa19.19■□□□□ 0.66
CLTA-202ENST00000345519 GSAPA4D1B5 854 aa19.18■□□□□ 0.66
CLTA-202ENST00000345519 H3BMH7 237 aa19.18■□□□□ 0.66
CLTA-202ENST00000345519 TK2O00142 265 aa19.18■□□□□ 0.66
CLTA-202ENST00000345519 ERGP11308 486 aa19.18■□□□□ 0.66
CLTA-202ENST00000345519 LIFP15018 202 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms