RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SLC17A9Q9BYT1 436 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 CALML5Q9NZT1 146 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 BLVRAP53004 296 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 MBTPS1Q14703 1052 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 TRMT10BQ6PF06 316 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 NPAS3Q8IXF0 933 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 CPSF7Q8N684 471 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 PEX13Q92968 403 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 DNAAF2Q9NVR5 837 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 MAT2BQ9NZL9 334 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 COLQQ9Y215 455 aaPredicted RBP16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 PRR5-ARHGAP8B1AHC4 643 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 SUV39H1O43463 412 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 DCNP07585 359 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 ARL13AQ5H913 290 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 TMC8Q8IU68 726 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 CLHC1Q8NHS4 586 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 C1orf109Q9NX04 203 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 MTAPQ13126 283 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 DCAF12L1Q5VU92 463 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 PLEKHM3Q6ZWE6 761 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 ZNF572Q7Z3I7 529 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 RABEPKQ7Z6M1 372 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 DCUN1D3Q8IWE4 304 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 SCML4Q8N228 414 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 PHF10Q8WUB8 498 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 TSACCQ96A04 125 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 ESAMQ96AP7 390 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 PGAP3Q96FM1 320 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 EQTNQ9NQ60 294 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 A0A0G2JN53 185 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 SCN2BO60939 215 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 SLC6A11P48066 632 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 MGAT3Q09327 533 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 METTL21CQ5VZV1 264 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 RNF44Q7L0R7 432 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 PMEPA1Q969W9 287 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 UHRF1Q96T88 793 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 MYH7P12883 1935 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 BMP7P18075 431 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 SERPINB1P30740 379 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 TMEM115Q12893 351 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 ZNF460Q14592 562 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 QPCTQ16769 361 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 BHLHE22Q8NFJ8 381 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 ADCY4Q8NFM4 1077 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 KIFC1Q9BW19 673 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 RIBC2Q9H4K1 309 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 HRASLS2Q9NWW9 162 aa16.07■□□□□ 0.16
SMARCA4-201ENST00000344626 NRP2O60462 931 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 GLDCP23378 1020 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 DNAJB1P25685 340 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 RPL4P36578 427 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 GSCP56915 257 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 GRIN2CQ14957 1233 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 KPNB1Q14974 876 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 SCD5Q86SK9 330 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 NXPE1Q8N323 547 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 DCAKDQ8WVC6 231 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 IMP4Q96G21 291 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 BTBD9Q96Q07 612 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 TEFMQ96QE5 360 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 RNF38Q9H0F5 515 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 FAM20BO75063 409 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 HLA-DQA2P01906 255 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 MRPS22P82650 360 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 SMAD4Q13485 552 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 NUDT13Q86X67 352 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 NATD1Q8N6N6 113 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 PYCR2Q96C36 320 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 RNF31Q96EP0 1072 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 KATNBL1Q9H079 304 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 SERTAD3Q9UJW9 196 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 MYH6P13533 1939 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 DCLK1O15075 740 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 ATF6P18850 670 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 MYL12AP19105 171 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 STC1P52823 247 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 BNC1Q01954 994 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 DUSP6Q16828 381 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 KIAA0319Q5VV43 1072 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 ZNF605Q86T29 641 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 COMMD2Q86X83 199 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 MCEMP1Q8IX19 187 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 SLC9A6Q92581 669 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 MAGEL2Q9UJ55 1249 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 LDB2O43679 373 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 VEGFDO43915 354 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 KERAO60938 352 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 TCEA1P23193 301 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 TPP2P29144 1249 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 HNF1BP35680 557 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 PREPP48147 710 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 PLEKHS1Q5SXH7 462 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 TMEM126BQ8IUX1 230 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 RTP3Q9BQQ7 232 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 TMEM245Q9H330 911 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 IL21RQ9HBE5 538 aa16.06■□□□□ 0.16
SMARCA4-201ENST00000344626 NEK6Q9HC98 313 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms