RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 PADI1Q9ULC6 663 aa15.58■□□□□ 0.08
ATG4B-201ENST00000344376 MRFAP1Q9Y605 127 aa15.58■□□□□ 0.08
ATG4B-201ENST00000344376 USP27XA6NNY8 438 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 GOLGA8KD6RF30 607 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 GOLGA8TH3BQL2 631 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 CPNE3O75131 537 aaKnown RBP15.57■□□□□ 0.08
ATG4B-201ENST00000344376 SCRG1O75711 98 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 ESR1P03372 595 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 DLSTP36957 453 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 THOC5Q13769 683 aaKnown RBP15.57■□□□□ 0.08
ATG4B-201ENST00000344376 LY6DQ14210 128 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 TYSND1Q2T9J0 566 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 NEPROQ6NW34 567 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 TTC23LQ6PF05 361 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 UNC5AQ6ZN44 842 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 DCUN1D3Q8IWE4 304 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 CFAP61Q8NHU2 1237 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 SKA2Q8WVK7 121 aaPredicted RBP15.57■□□□□ 0.08
ATG4B-201ENST00000344376 STARD8Q92502 1023 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 RNF31Q96EP0 1072 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 MED8Q96G25 268 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 LATS2Q9NRM7 1088 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 KCND3Q9UK17 655 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 CROTQ9UKG9 612 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 MAD1L1Q9Y6D9 718 aa15.57■□□□□ 0.08
ATG4B-201ENST00000344376 SLCO2B1O94956 709 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 TIAF1O95411 115 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 CHRM5P08912 532 aaPredicted RBP15.56■□□□□ 0.08
ATG4B-201ENST00000344376 ST6GAL1P15907 406 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 FMO4P31512 558 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 RAB28P51157 221 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 ADARP55265 1226 aaKnown RBP15.56■□□□□ 0.08
ATG4B-201ENST00000344376 ABRQ12979 859 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 TBR1Q16650 682 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 ANKRD20A4Q4UJ75 823 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 PLEKHS1Q5SXH7 462 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 VRK3Q8IV63 474 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 NAT8LQ8N9F0 302 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 LPGAT1Q92604 370 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 ZNF501Q96CX3 271 aaPredicted RBP15.56■□□□□ 0.08
ATG4B-201ENST00000344376 FOPNLQ96NB1 174 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 RUNDC3BQ96NL0 473 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 TRAPPC9Q96Q05 1148 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 NAPGQ99747 312 aaPredicted RBP15.56■□□□□ 0.08
ATG4B-201ENST00000344376 DDX47Q9H0S4 455 aaKnown RBP15.56■□□□□ 0.08
ATG4B-201ENST00000344376 LHX9Q9NQ69 397 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 IL17BQ9UHF5 180 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 PLAGL1Q9UM63 463 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 CDYLQ9Y232 598 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 PCDHB3Q9Y5E6 796 aa15.56■□□□□ 0.08
ATG4B-201ENST00000344376 PIKFYVEQ9Y2I7 2098 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 SMG1Q96Q15 3661 aaKnown RBP15.55■□□□□ 0.08
ATG4B-201ENST00000344376 NTRK1P04629 796 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 MSL3P1P0C860 447 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 SFTPCP11686 197 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 UGT2B7P16662 529 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 TCN2P20062 427 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 CDC20Q12834 499 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 PTK6Q13882 451 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 KIR2DS3Q14952 304 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 ZNF470Q6ECI4 717 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 BORAQ6PGQ7 559 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 PCGF5Q86SE9 256 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 CILP2Q8IUL8 1156 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 RAB42Q8N4Z0 105 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 N4BP2L2Q92802 583 aaPredicted RBP15.55■□□□□ 0.08
ATG4B-201ENST00000344376 SLCO2A1Q92959 643 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 CAPZA3Q96KX2 299 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 NRTNQ99748 197 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 RAB11FIP5Q9BXF6 653 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 INTS10Q9NVR2 710 aaKnown RBP15.55■□□□□ 0.08
ATG4B-201ENST00000344376 SAR1BQ9Y6B6 198 aa15.55■□□□□ 0.08
ATG4B-201ENST00000344376 A0A0J9YY10 115 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 CTAGE9A4FU28 777 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 ISM1B1AKI9 464 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 C21orf140B9A014 251 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 TMEM150CB9EJG8 249 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 E5RI56 91 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 ZNF500O60304 480 aaPredicted RBP15.54■□□□□ 0.08
ATG4B-201ENST00000344376 KATNA1O75449 491 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 C1QL1O75973 258 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 USP1O94782 785 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 PRKAR1AP10644 381 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 PVRP15151 417 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 CYP2A7P20853 494 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 PKLRP30613 574 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 MAGEA3P43357 314 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 DNASE1L3Q13609 305 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 COL9A2Q14055 689 aaPredicted RBP15.54■□□□□ 0.08
ATG4B-201ENST00000344376 KYNUQ16719 465 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 LINC00303Q3SY05 128 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 CRTC2Q53ET0 693 aaPredicted RBP15.54■□□□□ 0.08
ATG4B-201ENST00000344376 CTSL3PQ5NE16 218 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 RNASEH2BQ5TBB1 312 aaKnown RBP15.54■□□□□ 0.08
ATG4B-201ENST00000344376 PAPD7Q5XG87 772 aaKnown RBP15.54■□□□□ 0.08
ATG4B-201ENST00000344376 TMEM135Q86UB9 458 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 LMNTD2Q8IXW0 634 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 C19orf47Q8N9M1 422 aaKnown RBP15.54■□□□□ 0.08
ATG4B-201ENST00000344376 CALML6Q8TD86 181 aa15.54■□□□□ 0.08
ATG4B-201ENST00000344376 SLC22A18Q96BI1 424 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms