RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 GEMIN8Q9NWZ8 242 aaKnown RBP17.52■□□□□ 0.4
USF2-202ENST00000343550 KLHL3Q9UH77 587 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 UTP11Q9Y3A2 253 aaKnown RBP17.52■□□□□ 0.4
USF2-202ENST00000343550 C9P02748 559 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 ESR1P03372 595 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 CSE1LP55060 971 aaKnown RBP17.52■□□□□ 0.39
USF2-202ENST00000343550 NFKB2Q00653 900 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 CALCOCO2Q13137 446 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 TUBB2AQ13885 445 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 BORAQ6PGQ7 559 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 CEACAM20Q6UY09 585 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 KCNMB4Q86W47 210 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 VRK3Q8IV63 474 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 NLGN4XQ8N0W4 816 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 NLGN4YQ8NFZ3 816 aaPredicted RBP17.52■□□□□ 0.39
USF2-202ENST00000343550 RSC1A1Q92681 617 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 TUBB2BQ9BVA1 445 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 RAB33BQ9H082 229 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 MVB12BQ9H7P6 319 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 GRHL1Q9NZI5 618 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 EPHA6Q9UF33 1036 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 ZC3H7BQ9UGR2 993 aaKnown RBP17.52■□□□□ 0.39
USF2-202ENST00000343550 VPS9D1Q9Y2B5 631 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 MRFAP1Q9Y605 127 aa17.52■□□□□ 0.39
USF2-202ENST00000343550 E7ESA3 106 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 KPNA5O15131 536 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 CAPN5O15484 640 aaPredicted RBP17.51■□□□□ 0.39
USF2-202ENST00000343550 SLCO2B1O94956 709 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 APOA4P06727 396 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 ERVK-10P10266 1014 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 MAP4P27816 1152 aaKnown RBP17.51■□□□□ 0.39
USF2-202ENST00000343550 SLC1A2P43004 574 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 CAPZBP47756 277 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 GFERP55789 205 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 PDIA2Q13087 525 aaKnown RBP17.51■□□□□ 0.39
USF2-202ENST00000343550 PLCL1Q15111 1095 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 SYTL3Q4VX76 610 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 UNC5AQ6ZN44 842 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 SLC22A15Q8IZD6 547 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 ACVR1CQ8NER5 493 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 KIF18AQ8NI77 898 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 LRRC1Q9BTT6 524 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 SLC25A18Q9H1K4 315 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 LATS2Q9NRM7 1088 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 IARS2Q9NSE4 1012 aaKnown RBP17.51■□□□□ 0.39
USF2-202ENST00000343550 FBXO5Q9UKT4 447 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 CHMP2BQ9UQN3 213 aa17.51■□□□□ 0.39
USF2-202ENST00000343550 MN1Q10571 1320 aaPredicted RBP17.51■□□□□ 0.39
USF2-202ENST00000343550 H3BMM5 538 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 SUV39H1O43463 412 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 HAUS5O94927 633 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 F7P08709 466 aaPredicted RBP17.5■□□□□ 0.39
USF2-202ENST00000343550 PKMP14618 531 aaKnown RBP17.5■□□□□ 0.39
USF2-202ENST00000343550 PRKG2Q13237 762 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 TRADDQ15628 312 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 KLHL35Q6PF15 583 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 ATG14Q6ZNE5 492 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 ANKMY2Q8IV38 441 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 OR4E2Q8NGC2 313 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 SLC45A3Q96JT2 553 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 C9orf72Q96LT7 481 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 TGM7Q96PF1 710 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 FAM167BQ9BTA0 163 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 RAB17Q9H0T7 212 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 ADNPQ9H2P0 1102 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 GPN2Q9H9Y4 310 aaPredicted RBP17.5■□□□□ 0.39
USF2-202ENST00000343550 APMAPQ9HDC9 416 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 FBXO6Q9NRD1 293 aaPredicted RBP17.5■□□□□ 0.39
USF2-202ENST00000343550 ASF1AQ9Y294 204 aa17.5■□□□□ 0.39
USF2-202ENST00000343550 ZNF891A8MT65 544 aaPredicted RBP17.49■□□□□ 0.39
USF2-202ENST00000343550 POLR1CO15160 346 aaPredicted RBP17.49■□□□□ 0.39
USF2-202ENST00000343550 NIPSNAP2O75323 286 aa17.49■□□□□ 0.39
USF2-202ENST00000343550 CHRM3P20309 590 aa17.49■□□□□ 0.39
USF2-202ENST00000343550 LEPRP48357 1165 aaKnown RBP17.49■□□□□ 0.39
USF2-202ENST00000343550 CSRP3P50461 194 aa17.49■□□□□ 0.39
USF2-202ENST00000343550 STEAP4Q687X5 459 aa17.49■□□□□ 0.39
USF2-202ENST00000343550 ZNF549Q6P9A3 640 aa17.49■□□□□ 0.39
USF2-202ENST00000343550 OTOAQ7RTW8 1153 aa17.49■□□□□ 0.39
USF2-202ENST00000343550 TIPARPQ7Z3E1 657 aaKnown RBP17.49■□□□□ 0.39
USF2-202ENST00000343550 C2CD4AQ8NCU7 369 aaPredicted RBP17.49■□□□□ 0.39
USF2-202ENST00000343550 OR5AR1Q8NGP9 310 aa17.49■□□□□ 0.39
USF2-202ENST00000343550 KIAA1143Q96AT1 154 aaPredicted RBP17.49■□□□□ 0.39
USF2-202ENST00000343550 CFAP36Q96G28 342 aa17.49■□□□□ 0.39
USF2-202ENST00000343550 ZDHHC12Q96GR4 267 aa17.49■□□□□ 0.39
USF2-202ENST00000343550 TRIM4Q9C037 500 aa17.49■□□□□ 0.39
USF2-202ENST00000343550 TFB2MQ9H5Q4 396 aaKnown RBP17.49■□□□□ 0.39
USF2-202ENST00000343550 HRASLS2Q9NWW9 162 aa17.49■□□□□ 0.39
USF2-202ENST00000343550 GALPQ9UBC7 116 aa17.49■□□□□ 0.39
USF2-202ENST00000343550 IL17BQ9UHF5 180 aa17.49■□□□□ 0.39
USF2-202ENST00000343550 TMEM184BQ9Y519 407 aaPredicted RBP17.49■□□□□ 0.39
USF2-202ENST00000343550 BSNQ9UPA5 3926 aa17.49■□□□□ 0.39
USF2-202ENST00000343550 OR6C74A6NCV1 312 aa17.48■□□□□ 0.39
USF2-202ENST00000343550 OR5K3A6NET4 321 aa17.48■□□□□ 0.39
USF2-202ENST00000343550 TOX3O15405 576 aaPredicted RBP17.48■□□□□ 0.39
USF2-202ENST00000343550 STK17BO94768 372 aa17.48■□□□□ 0.39
USF2-202ENST00000343550 ANKRD34CP0C6C1 535 aa17.48■□□□□ 0.39
USF2-202ENST00000343550 MPP1Q00013 466 aa17.48■□□□□ 0.39
USF2-202ENST00000343550 SLC7A5Q01650 507 aa17.48■□□□□ 0.39
USF2-202ENST00000343550 ABRQ12979 859 aa17.48■□□□□ 0.39
USF2-202ENST00000343550 FASTKD3Q14CZ7 662 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms