RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ITPKAP23677 461 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 RPS14P62263 151 aaKnown RBP19.5■□□□□ 0.71
RTN1-202ENST00000342503 EMX2Q04743 252 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 CEACAM7Q14002 265 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 CCSMST1Q4G0I0 132 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 KIAA1211LQ6NV74 962 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 LAYNQ6UX15 382 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 ADAMTSL4Q6UY14 1074 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 HACD2Q6Y1H2 254 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 RNF165Q6ZSG1 346 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 RETREG3Q86VR2 466 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 NECTIN4Q96NY8 510 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 DNAJC11Q9NVH1 559 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 STX18Q9P2W9 335 aaKnown RBP19.5■□□□□ 0.71
RTN1-202ENST00000342503 ZNHIT2Q9UHR6 403 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 ZNF490Q9ULM2 529 aaPredicted RBP19.5■□□□□ 0.71
RTN1-202ENST00000342503 SLC22A14Q9Y267 594 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 NDUFAF1Q9Y375 327 aa19.5■□□□□ 0.71
RTN1-202ENST00000342503 COL4A2P08572 1712 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 SLC28A1O00337 649 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 LIN7AO14910 233 aaPredicted RBP19.49■□□□□ 0.71
RTN1-202ENST00000342503 RGS14O43566 566 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 VEGFDO43915 354 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 ULK1O75385 1050 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 PFN3P60673 137 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 UFM1P61960 85 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 AP5B1Q2VPB7 878 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 VPS26BQ4G0F5 336 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 SGO1Q5FBB7 561 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 ZNF776Q68DI1 518 aaPredicted RBP19.49■□□□□ 0.71
RTN1-202ENST00000342503 PNCKQ6P2M8 343 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 BLOC1S3Q6QNY0 202 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 XKR5Q6UX68 686 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 ZNF547Q8IVP9 402 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 SMRP1Q8NCR6 262 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 COX14Q96I36 57 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 TEX37Q96LM6 180 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 FOPNLQ96NB1 174 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 EBF2Q9HAK2 575 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 HEBP1Q9NRV9 189 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 TMEM98Q9Y2Y6 226 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 TRPM6Q9BX84 2022 aa19.49■□□□□ 0.71
RTN1-202ENST00000342503 E7ENX8 843 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 H3BM21 787 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 FKBP6O75344 327 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 SLC22A3O75751 556 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 MAPK9P45984 424 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 ZFP36L2P47974 494 aaKnown RBP19.48■□□□□ 0.71
RTN1-202ENST00000342503 SLC34A1Q06495 639 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 SLC44A4Q53GD3 710 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 C8orf82Q6P1X6 216 aaPredicted RBP19.48■□□□□ 0.71
RTN1-202ENST00000342503 CRTC3Q6UUV7 619 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 RNF148Q8N7C7 305 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 PCYOX1LQ8NBM8 494 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 OR2T3Q8NH03 318 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 USP7Q93009 1102 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 ZNF514Q96K75 400 aaPredicted RBP19.48■□□□□ 0.71
RTN1-202ENST00000342503 LINC00615Q96LM1 132 aaPredicted RBP19.48■□□□□ 0.71
RTN1-202ENST00000342503 PPP3R2Q96LZ3 170 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 CCDC138Q96M89 665 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 SLC52A3Q9NQ40 469 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 ADA2Q9NZK5 511 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 ZIM2Q9NZV7 527 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 MAP10Q9P2G4 905 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 CROTQ9UKG9 612 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 GPR34Q9UPC5 381 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 KCNE1BA0A087WTH5 132 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 ANGPT2O15123 496 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 RNASEH2AO75792 299 aaKnown RBP19.48■□□□□ 0.71
RTN1-202ENST00000342503 POP7O75817 140 aaKnown RBP19.48■□□□□ 0.71
RTN1-202ENST00000342503 EGFP01133 1207 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 XRCC1P18887 633 aaPredicted RBP19.48■□□□□ 0.71
RTN1-202ENST00000342503 ME2P23368 584 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 NTSR1P30989 418 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 CTHP32929 405 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 SESN3P58005 492 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 CPSF6Q16630 551 aaKnown RBP eCLIP19.48■□□□□ 0.71
RTN1-202ENST00000342503 WSCD2Q2TBF2 565 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 PLA2G4EQ3MJ16 856 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 GGTA1PQ4G0N0 100 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 COL13A1Q5TAT6 717 aaPredicted RBP19.48■□□□□ 0.71
RTN1-202ENST00000342503 TRIM46Q7Z4K8 759 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 HEATR4Q86WZ0 1026 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 HIPK4Q8NE63 616 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 JADE3Q92613 823 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 ROPN1LQ96C74 230 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 MTFMTQ96DP5 389 aaKnown RBP19.48■□□□□ 0.71
RTN1-202ENST00000342503 PKP4Q99569 1192 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 TACO1Q9BSH4 297 aaKnown RBP19.48■□□□□ 0.71
RTN1-202ENST00000342503 S100A14Q9HCY8 104 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 STOX2Q9P2F5 926 aaPredicted RBP19.48■□□□□ 0.71
RTN1-202ENST00000342503 CIDEBQ9UHD4 219 aa19.48■□□□□ 0.71
RTN1-202ENST00000342503 POLR3HQ9Y535 204 aaPredicted RBP19.48■□□□□ 0.71
RTN1-202ENST00000342503 DOCK9Q9BZ29 2069 aa19.47■□□□□ 0.71
RTN1-202ENST00000342503 TRIM38O00635 465 aa19.47■□□□□ 0.71
RTN1-202ENST00000342503 KRT6AP02538 564 aa19.47■□□□□ 0.71
RTN1-202ENST00000342503 KRT6BP04259 564 aa19.47■□□□□ 0.71
RTN1-202ENST00000342503 MSX2P35548 267 aaPredicted RBP19.47■□□□□ 0.71
RTN1-202ENST00000342503 PTDSS1P48651 473 aaKnown RBP19.47■□□□□ 0.71
RTN1-202ENST00000342503 KRT6CP48668 564 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms