RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SERTAD3Q9UJW9 196 aa10.64□□□□□ -0.71
ATXN3-201ENST00000340660 NPFFR2Q9Y5X5 522 aa10.64□□□□□ -0.71
ATXN3-201ENST00000340660 PHF3Q92576 2039 aaKnown RBP10.63□□□□□ -0.71
ATXN3-201ENST00000340660 A0A0G2JNJ9 132 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 A0A1B0GTH9 108 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 CELA2AP08217 269 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 MSL3P1P0C860 447 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 MYBL2P10244 700 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 NME2P22392 152 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 ZFP36L2P47974 494 aaKnown RBP10.63□□□□□ -0.71
ATXN3-201ENST00000340660 ANKRD1Q15327 319 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 KNOP1Q1ED39 458 aaKnown RBP10.63□□□□□ -0.71
ATXN3-201ENST00000340660 BRMS1LQ5PSV4 323 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 NLRP14Q86W24 1093 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 GPR150Q8NGU9 434 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 CASKIN2Q8WXE0 1202 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 SCAMP4Q969E2 229 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 INTS4Q96HW7 963 aaKnown RBP10.63□□□□□ -0.71
ATXN3-201ENST00000340660 MED15Q96RN5 788 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 AP1M1Q9BXS5 423 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 BEX2Q9BXY8 128 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 MAGEH1Q9H213 219 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 ABCG8Q9H221 673 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 SP110Q9HB58 689 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 SYTL2Q9HCH5 934 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 KLHL1Q9NR64 748 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 Q9UFV3 132 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 SLC23A2Q9UGH3 650 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 CMYA5Q8N3K9 4069 aa10.63□□□□□ -0.71
ATXN3-201ENST00000340660 PDZK1P1A8MUH7 402 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 H3BMH7 237 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 SYT5O00445 386 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 TRAFD1O14545 582 aaPredicted RBP10.62□□□□□ -0.71
ATXN3-201ENST00000340660 RASGRF2O14827 1237 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 RPL10P27635 214 aaKnown RBP10.62□□□□□ -0.71
ATXN3-201ENST00000340660 SERPINA4P29622 427 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 VIPR1P32241 457 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 ACADSBP45954 432 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 PTH2RP49190 550 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 CUL2Q13617 745 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 PTPRRQ15256 657 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 RBBP7Q16576 425 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 SLC25A35Q3KQZ1 300 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 SHISA6Q6ZSJ9 500 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 AMER2Q8N7J2 671 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.62□□□□□ -0.71
ATXN3-201ENST00000340660 OR10Q1Q8NGQ4 319 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 PROKR1Q8TCW9 393 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 ZFPM2Q8WW38 1151 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 CXorf40BQ96DE9 158 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 MRM3Q9HC36 420 aaKnown RBP10.62□□□□□ -0.71
ATXN3-201ENST00000340660 TMEM8AQ9HCN3 771 aa10.62□□□□□ -0.71
ATXN3-201ENST00000340660 SHOX2O60902 331 aaPredicted RBP10.61□□□□□ -0.71
ATXN3-201ENST00000340660 PAEPP09466 180 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 ITGAXP20702 1163 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 LMAN1P49257 510 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 HYAL4Q2M3T9 481 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 KLHL35Q6PF15 583 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 ABRAXAS1Q6UWZ7 409 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 WDR53Q7Z5U6 358 aaPredicted RBP10.61□□□□□ -0.71
ATXN3-201ENST00000340660 TMEM110Q86TL2 294 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 TSPAN33Q86UF1 283 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 CARFQ8N187 725 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 ISL2Q96A47 359 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 AP2M1Q96CW1 435 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 CCL19Q99731 98 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 SH3GL2Q99962 352 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 KLHL25Q9H0H3 589 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 ATP13A3Q9H7F0 1226 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 HRASLS2Q9NWW9 162 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 TAS2R14Q9NYV8 317 aa10.61□□□□□ -0.71
ATXN3-201ENST00000340660 PPARGC1AQ9UBK2 798 aaKnown RBP10.61□□□□□ -0.71
ATXN3-201ENST00000340660 CNOT6Q9ULM6 557 aaKnown RBP10.61□□□□□ -0.71
ATXN3-201ENST00000340660 USP27XA6NNY8 438 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 RAMP2O60895 175 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 BMP10O95393 424 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 CYP1A1P04798 512 aaPredicted RBP10.6□□□□□ -0.71
ATXN3-201ENST00000340660 FDXRP22570 491 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 MAPKAPK2P49137 400 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 DRG2P55039 364 aaKnown RBP10.6□□□□□ -0.71
ATXN3-201ENST00000340660 POLR2LP62875 67 aaKnown RBP10.6□□□□□ -0.71
ATXN3-201ENST00000340660 NKG7Q16617 165 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 DENND1BQ6P3S1 775 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.6□□□□□ -0.71
ATXN3-201ENST00000340660 MDS2Q8NDY4 140 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 OR5M3Q8NGP4 307 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 LINC01560Q8TB33 94 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 TMEM174Q8WUU8 243 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 C8orf44Q96CB5 159 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 PGAP3Q96FM1 320 aaPredicted RBP10.6□□□□□ -0.71
ATXN3-201ENST00000340660 SCMH1Q96GD3 660 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 PLCB1Q9NQ66 1216 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 RAB20Q9NX57 234 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 WDR37Q9Y2I8 494 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 HYDINQ4G0P3 5121 aa10.6□□□□□ -0.71
ATXN3-201ENST00000340660 TUBAL3A6NHL2 446 aa10.59□□□□□ -0.71
ATXN3-201ENST00000340660 NPIPB15A6NHN6 443 aaPredicted RBP10.59□□□□□ -0.71
ATXN3-201ENST00000340660 PSMD11O00231 422 aa10.59□□□□□ -0.71
ATXN3-201ENST00000340660 CES2O00748 559 aa10.59□□□□□ -0.71
ATXN3-201ENST00000340660 NUAK1O60285 661 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms