RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 AGGF1Q8N302 714 aaeCLIP16.5■□□□□ 0.23
BRCC3-202ENST00000340647 MPP5Q8N3R9 675 aa16.5■□□□□ 0.23
BRCC3-202ENST00000340647 LINC01555Q8NAE3 123 aa16.5■□□□□ 0.23
BRCC3-202ENST00000340647 OR5K2Q8NHB8 316 aa16.5■□□□□ 0.23
BRCC3-202ENST00000340647 CARD6Q9BX69 1037 aa16.5■□□□□ 0.23
BRCC3-202ENST00000340647 TTC7AQ9ULT0 858 aaPredicted RBP16.5■□□□□ 0.23
BRCC3-202ENST00000340647 ASF1AQ9Y294 204 aa16.5■□□□□ 0.23
BRCC3-202ENST00000340647 MATN2O00339 956 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 QSOX1O00391 747 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 CD3EAPO15446 510 aaKnown RBP16.49■□□□□ 0.23
BRCC3-202ENST00000340647 AVILO75366 819 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 KATNA1O75449 491 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 CREG1O75629 220 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 SCRG1O75711 98 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 TMEM63AO94886 807 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 SLCO2B1O94956 709 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 UGT2B7P16662 529 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 AOAHP28039 575 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 CCR10P46092 362 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 BASP1P80723 227 aaKnown RBP16.49■□□□□ 0.23
BRCC3-202ENST00000340647 IL10RAQ13651 578 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 FASTKD1Q53R41 847 aaKnown RBP16.49■□□□□ 0.23
BRCC3-202ENST00000340647 CTSL3PQ5NE16 218 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 ZNF385CQ66K41 422 aaPredicted RBP16.49■□□□□ 0.23
BRCC3-202ENST00000340647 SPESP1Q6UW49 350 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 FAM20CQ8IXL6 584 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 PPHLN1Q8NEY8 458 aaKnown RBP16.49■□□□□ 0.23
BRCC3-202ENST00000340647 IL22Q9GZX6 179 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 KCNF1Q9H3M0 494 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 ACTL8Q9H568 366 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 CATSPERZQ9NTU4 200 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 TUBD1Q9UJT1 453 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 PCDHB3Q9Y5E6 796 aa16.49■□□□□ 0.23
BRCC3-202ENST00000340647 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.48■□□□□ 0.23
BRCC3-202ENST00000340647 KRT87PA6NCN2 255 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 GOLGA8KD6RF30 607 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 GOLGA8TH3BQL2 631 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 GAS8O95995 478 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 MT-ND3P03897 115 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 CHRM5P08912 532 aaPredicted RBP16.48■□□□□ 0.23
BRCC3-202ENST00000340647 NPY2RP49146 381 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 ARL4DP49703 201 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 PRAMEP78395 509 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 PRKAA1Q13131 559 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 CYP1B1Q16678 543 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 PRICKLE2Q7Z3G6 844 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 PTRH1Q86Y79 214 aaKnown RBP16.48■□□□□ 0.23
BRCC3-202ENST00000340647 TMEM126BQ8IUX1 230 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 TMEM151BQ8IW70 566 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 DSELQ8IZU8 1212 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 OR8K5Q8NH50 307 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 COG1Q8WTW3 980 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 ABHD17AQ96GS6 310 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 LRFN5Q96NI6 719 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 BIRC8Q96P09 236 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 CHST8Q9H2A9 424 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 MRM3Q9HC36 420 aaKnown RBP16.48■□□□□ 0.23
BRCC3-202ENST00000340647 PCMTD2Q9NV79 361 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 SOHLH2Q9NX45 425 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 GALPQ9UBC7 116 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 CIDEBQ9UHD4 219 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 HEATR5BQ9P2D3 2071 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 PTPN13Q12923 2485 aa16.48■□□□□ 0.23
BRCC3-202ENST00000340647 PIPSLA2A3N6 862 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 C2orf74A8MZ97 194 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 C21orf140B9A014 251 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 TMEM150CB9EJG8 249 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 PRMT5O14744 637 aaPredicted RBP16.47■□□□□ 0.23
BRCC3-202ENST00000340647 CPNE3O75131 537 aaKnown RBP16.47■□□□□ 0.23
BRCC3-202ENST00000340647 RECKO95980 971 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 F7P08709 466 aaPredicted RBP16.47■□□□□ 0.23
BRCC3-202ENST00000340647 CCNYL3P0C7X3 344 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 SFTPCP11686 197 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 NR1D1P20393 614 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 VPS41P49754 854 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 TERF1P54274 439 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 MC1RQ01726 317 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 HSPA14Q0VDF9 509 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 KYNUQ16719 465 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 CCSMST1Q4G0I0 132 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 TMTC4Q5T4D3 741 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 FAM198BQ6UWH4 519 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 C4orf22Q6V702 233 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 ADAMTS17Q8TE56 1095 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 APOBEC4Q8WW27 367 aaKnown RBP16.47■□□□□ 0.23
BRCC3-202ENST00000340647 MAIP1Q8WWC4 291 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 CPT1BQ92523 772 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.47■□□□□ 0.23
BRCC3-202ENST00000340647 TRIM55Q9BYV6 548 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 TRIM4Q9C037 500 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 ZNF71Q9NQZ8 489 aaPredicted RBP16.47■□□□□ 0.23
BRCC3-202ENST00000340647 KCND3Q9UK17 655 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 SOX13Q9UN79 622 aa16.47■□□□□ 0.23
BRCC3-202ENST00000340647 TDRKHQ9Y2W6 561 aaKnown RBP16.47■□□□□ 0.23
BRCC3-202ENST00000340647 MDC1Q14676 2089 aaKnown RBP16.46■□□□□ 0.23
BRCC3-202ENST00000340647 MEN1O00255 615 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 PRICKLE3O43900 615 aaPredicted RBP16.46■□□□□ 0.23
BRCC3-202ENST00000340647 PDGFAP04085 211 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 RPS3P23396 243 aaKnown RBP eCLIP16.46■□□□□ 0.23
BRCC3-202ENST00000340647 PTPN4P29074 926 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms