RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 CCR10P46092 362 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 HERVK_113P63132 956 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 CDKL1Q00532 357 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 SETDB1Q15047 1291 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 RPE65Q16518 533 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 ZXDCQ2QGD7 858 aaPredicted RBP13□□□□□ -0.33
GTF2F2-201ENST00000340473 ZNF678Q5SXM1 525 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 WASH2PQ6VEQ5 465 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 ATG14Q6ZNE5 492 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 TAF8Q7Z7C8 310 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 CCNYL1Q8N7R7 359 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 FBXO15Q8NCQ5 510 aaPredicted RBP13□□□□□ -0.33
GTF2F2-201ENST00000340473 RAB3IL1Q8TBN0 382 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 L3HYPDHQ96EM0 354 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 PKP4Q99569 1192 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 TMEM79Q9BSE2 394 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 ERVK-6Q9BXR3 956 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 TRIM54Q9BYV2 358 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 WASH6PQ9NQA3 447 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 IMP3Q9NV31 184 aaKnown RBP13□□□□□ -0.33
GTF2F2-201ENST00000340473 TAAR2Q9P1P5 351 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 PTBP2Q9UKA9 531 aaKnown RBP13□□□□□ -0.33
GTF2F2-201ENST00000340473 TMCO1Q9UM00 188 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 SNX11Q9Y5W9 270 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 MYO15AQ9UKN7 3530 aa12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 STX16-NPEPL1H3BU86 382 aa12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 STX16O14662 325 aa12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 LYPLA1O75608 230 aaPredicted RBP12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 ANXA5P08758 320 aa12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 EEF1DP29692 281 aaKnown RBP12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 CTSKP43235 329 aa12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 AP1S2P56377 157 aa12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 STX3Q13277 289 aa12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 UNC50Q53HI1 259 aa12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 SULT1C3Q6IMI6 304 aa12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 ABRAXAS1Q6UWZ7 409 aa12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 TRIM42Q8IWZ5 723 aa12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 OR5K2Q8NHB8 316 aa12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 SREK1Q8WXA9 508 aaKnown RBP12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 ZNF317Q96PQ6 595 aaPredicted RBP12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 SLCO1B3Q9NPD5 702 aa12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 FSCN3Q9NQT6 498 aa12.99□□□□□ -0.33
GTF2F2-201ENST00000340473 PRAMEF33A0A0G2JMD5 474 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 MYO1CO00159 1063 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 ITM2AO43736 263 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 F3P13726 295 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 SEC24CP53992 1094 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 PRKG2Q13237 762 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 GRB7Q14451 532 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 ATG16L1Q676U5 607 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 RAB44Q7Z6P3 723 aaPredicted RBP12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 SFTPA2Q8IWL1 248 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 NRTNQ99748 197 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 WWOXQ9NZC7 414 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 R4GN57 208 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 TMEM131Q92545 1883 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 TRBV23OR9-2A0A075B6M9 112 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 PABPN1LA6NDY0 278 aaKnown RBP12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 SDC3O75056 442 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 SNNO75324 88 aaPredicted RBP12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 H2AFYO75367 372 aaKnown RBP12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 SLC16A8O95907 504 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 RPS17P08708 135 aaKnown RBP12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 MTHFD1P11586 935 aaKnown RBP12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 GRK2P25098 689 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 HALP42357 657 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 HSPA7P48741 367 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 NUBP1P53384 320 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 ASPHQ12797 758 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 ELOCQ15369 112 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 CDKL4Q5MAI5 379 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 FAM47EQ6ZV65 393 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 DCUN1D3Q8IWE4 304 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 TBC1D21Q8IYX1 336 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 ZNF548Q8NEK5 533 aaPredicted RBP12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 LMX1AQ8TE12 382 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 UBTD2Q8WUN7 234 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 FBXL8Q96CD0 374 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 CCDC138Q96M89 665 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 NSUN5Q96P11 429 aaKnown RBP12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 FERD3LQ96RJ6 166 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 HGH1Q9BTY7 390 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 TRIT1Q9H3H1 467 aaKnown RBP12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 GSTO2Q9H4Y5 243 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 ERVMER34-1Q9H9K5 563 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 STOX2Q9P2F5 926 aaPredicted RBP12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 ZNF624Q9P2J8 865 aaPredicted RBP12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 PLAGL1Q9UM63 463 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 TDRKHQ9Y2W6 561 aaKnown RBP12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 CACNA1EQ15878 2313 aa12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 ARHGEF17Q96PE2 2063 aaPredicted RBP12.98□□□□□ -0.33
GTF2F2-201ENST00000340473 PATE3B3GLJ2 98 aa12.97□□□□□ -0.33
GTF2F2-201ENST00000340473 SUPT7LO94864 414 aa12.97□□□□□ -0.33
GTF2F2-201ENST00000340473 RPN2P04844 631 aa12.97□□□□□ -0.33
GTF2F2-201ENST00000340473 IMPA1P29218 277 aa12.97□□□□□ -0.33
GTF2F2-201ENST00000340473 GDF5P43026 501 aa12.97□□□□□ -0.33
GTF2F2-201ENST00000340473 SLC1A6P48664 564 aa12.97□□□□□ -0.33
GTF2F2-201ENST00000340473 ABCE1P61221 599 aaKnown RBP12.97□□□□□ -0.33
GTF2F2-201ENST00000340473 HNRNPKP61978 463 aaKnown RBP eCLIP12.97□□□□□ -0.33
GTF2F2-201ENST00000340473 PCBP2Q15366 365 aaKnown RBP eCLIP12.97□□□□□ -0.332e-10■■■■■ 66.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms