RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CYP11A1P05108 521 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 CBR1P16152 277 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 EPHA2P29317 976 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 HOXA13P31271 388 aaPredicted RBP9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 PIK3CBP42338 1070 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 UGT2B15P54855 530 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 FLI1Q01543 452 aaPredicted RBP9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 GCNT1Q02742 428 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 CDH17Q12864 832 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 SEMA5AQ13591 1074 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 FGL2Q14314 439 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 HFEQ30201 348 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF484Q5JVG2 852 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 SUSD1Q6UWL2 747 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 ABRAQ8N0Z2 381 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 TXNDC5Q8NBS9 432 aaKnown RBP9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 ADAMTS14Q8WXS8 1223 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 NCLNQ969V3 563 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 MRGPRX2Q96LB1 330 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 UBXN10Q96LJ8 280 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 MCCC1Q96RQ3 725 aaPredicted RBP9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 C19orf43Q9BQ61 176 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC22A4Q9H015 551 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 RIOX1Q9H6W3 641 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 HEXA-AS1Q9H8Q6 139 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 SETD4Q9NVD3 440 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 TAS2R16Q9NYV7 291 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 XPR1Q9UBH6 696 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 TRHDEQ9UKU6 1024 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 PMS2P1A4D2B8 440 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 C6orf229H3BNL8 230 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 GNGT2O14610 69 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 PCDH17O14917 1159 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 DLX3O60479 287 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 RFPL3O75679 317 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 ALPPP05187 535 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 KLK3P07288 261 aaPredicted RBP9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 SYPP08247 313 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF806P0C7X5 589 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 PTX3P26022 381 aaPredicted RBP9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF81P51508 661 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 PRELPP51888 382 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 AIF1P55008 147 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 CDH6P55285 790 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 CREMQ03060 361 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 GABPAQ06546 454 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 KCNC3Q14003 757 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 LARS2Q15031 903 aaKnown RBP9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 CDO1Q16878 200 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF691Q5VV52 312 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 PKN3Q6P5Z2 889 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 USP50Q70EL3 339 aaPredicted RBP9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 DPP9Q86TI2 863 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 GPALPP1Q8IXQ4 340 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 ZFP82Q8N141 532 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 CLRN3Q8NCR9 226 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 WDR36Q8NI36 951 aaKnown RBP9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC38A4Q969I6 547 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 LENG9Q96B70 501 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 KCNA7Q96RP8 456 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 TMEM168Q9H0V1 697 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 TMEM245Q9H330 911 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 SDHAF2Q9NX18 166 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 PAK5Q9P286 719 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 NLKQ9UBE8 527 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 MALT1Q9UDY8 824 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 PCDHB5Q9Y5E4 795 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 V9GYH0 126 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 NHSQ6T4R5 1651 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 ADGRA2Q96PE1 1338 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 C19orf81C9J6K1 198 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 KHNYNO15037 678 aaKnown RBP9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 LY86O95711 162 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 LDOC1O95751 146 aaPredicted RBP9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 APOC3P02656 99 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 HMGCRP04035 888 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 RAF1P04049 648 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 PFKLP17858 780 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 ZP3P21754 424 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 HLA-FP30511 346 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 RGS7P49802 495 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 AP1S2P56377 157 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 TRIM28Q13263 835 aaKnown RBP9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 PICALMQ13492 652 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 NOMO1Q15155 1222 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 NKG7Q16617 165 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 PAN3Q58A45 887 aaKnown RBP9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 GPR139Q6DWJ6 353 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF470Q6ECI4 717 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 JADE1Q6IE81 842 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF425Q6IV72 752 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 XKRXQ6PP77 449 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 ENPP6Q6UWR7 440 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 C5orf46Q6UWT4 87 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 RBMS3Q6XE24 437 aaKnown RBP9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF782Q6ZMW2 699 aaPredicted RBP9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 SPATA2LQ8IUW3 424 aaPredicted RBP9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 KIF12Q96FN5 646 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 C3orf30Q96M34 536 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 RBP7Q96R05 134 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms