RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 FAM217BQ9NTX9 383 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 PLCXD1Q9NUJ7 323 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 ZNF639Q9UID6 485 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 FBXL21Q9UKT6 434 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 INTS6Q9UL03 887 aaKnown RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 NRKQ7Z2Y5 1582 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 FLT4P35916 1363 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 SLIT1O75093 1534 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 GPR89AB7ZAQ6 455 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 PPEF2O14830 753 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 AHSGP02765 367 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 RLN2P04090 185 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 SPARCP09486 303 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 GPR89BP0CG08 455 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 CD1EP15812 388 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 NPR2P20594 1047 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 GLRA2P23416 452 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 GNALP38405 381 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 PIK3CGP48736 1102 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 PRELPP51888 382 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 ZNF143P52747 638 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 CEBPGP53567 150 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 GPX6P59796 221 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 KRT33BQ14525 404 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 PDIA6Q15084 440 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 ADGRF1Q5T601 910 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 JADE1Q6IE81 842 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 VITQ6UXI7 678 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 MRPL52Q86TS9 123 aaKnown RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 KIAA0895Q8NCT3 520 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 NR4A3Q92570 626 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 LPPQ93052 612 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 REPS1Q96D71 796 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 TRNT1Q96Q11 434 aaKnown RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 ZSCAN10Q96SZ4 725 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 KCNS3Q9BQ31 491 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 NKX6-2Q9C056 277 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 FBXL12Q9NXK8 326 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 NUDT5Q9UKK9 219 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 SLC39A10Q9ULF5 831 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 CRYBG1Q9Y4K1 1723 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 AP3D1O14617 1153 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 TOR1BO14657 336 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 UBDO15205 165 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 GSTA4O15217 222 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 CHADO15335 359 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 HSPA12AO43301 675 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 CA12O43570 354 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 FADS1O60427 444 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 CABYRO75952 493 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 PGK1P00558 417 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 PGRP06401 933 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 PTAFRP25105 342 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 DPP6P42658 865 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 RARRES1P49788 294 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 MLLT10P55197 1068 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 MAZP56270 477 aaKnown RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 RRAS2P62070 204 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 TP53BP2Q13625 1128 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 CYP51A1Q16850 503 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 MICBQ29980 383 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 TMEM236Q5W0B7 351 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 ANKRD54Q6NXT1 300 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 IQCHQ86VS3 1027 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 GLB1L3Q8NCI6 653 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 GATAD2BQ8WXI9 593 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 ST8SIA2Q92186 375 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 CPT1BQ92523 772 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 NELL1Q92832 810 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 ZNF559Q9BR84 538 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 FTHL17Q9BXU8 183 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 BLOC1S4Q9NUP1 217 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 PAK5Q9P286 719 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 AASSQ9UDR5 926 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 LRFN2Q9ULH4 789 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 NCKAP1Q9Y2A7 1128 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 MRPS23Q9Y3D9 190 aaKnown RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 TBX22Q9Y458 520 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 PIAS3Q9Y6X2 628 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 CHD2O14647 1828 aaKnown RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 MED1Q15648 1581 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 MAP3K4Q9Y6R4 1608 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 A0A0X1KG70 313 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 BCLAF3A2AJT9 711 aaKnown RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 MMP20O60882 483 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 C9P02748 559 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 TP53P04637 393 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 APRTP07741 180 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 ZNF250P15622 560 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 CD36P16671 472 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 RAB3BP20337 219 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 CYP2B6P20813 491 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 C5AR1P21730 350 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 ATP5F1P24539 256 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 GRIA3P42263 894 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 ACOT2P49753 483 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 HNMTP50135 292 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 SEC23BQ15437 767 aa4.08□□□□□ -1.76
NEDD4-201ENST00000338963 B3GNTL1Q67FW5 361 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-201ENST00000338963 XAF1Q6GPH4 301 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms