RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CDYLQ9Y232 598 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 NBASA2RRP1 2371 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 TCRBV7S3A2A0A539 114 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 HEATR9A2RTY3 570 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 KRT87PA6NCN2 255 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 MKRN2OSH3BPM6 223 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 LIN7AO14910 233 aaPredicted RBP12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 RFPL1O75677 317 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 APRTP07741 180 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 CHRM5P08912 532 aaPredicted RBP12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 OR56A5P0C7T3 313 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 CYP2A7P20853 494 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 NMBRP28336 390 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 PTGIRP43119 386 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 GABRA4P48169 554 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 PMS2P54278 862 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 ITGA1P56199 1179 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 FOXK1P85037 733 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 TCTN3Q6NUS6 607 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 CYB5D1Q6P9G0 228 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 SPESP1Q6UW49 350 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 ZBTB2Q8N680 514 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 TEX19Q8NA77 164 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 OR8K5Q8NH50 307 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 CPT1BQ92523 772 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 PCSK5Q92824 1860 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 VPS37BQ9H9H4 285 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 LATS2Q9NRM7 1088 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 ANAPC2Q9UJX6 822 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 TCAF1Q9Y4C2 921 aa12.92□□□□□ -0.34
NUDCD3-201ENST00000338427 RELNP78509 3460 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 A6NL46 340 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 ISM1B1AKI9 464 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 ZNF185O15231 689 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 RECKO95980 971 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 FTH1P02794 183 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 CXCR5P32302 372 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 GRIA3P42263 894 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 ACVR1Q04771 509 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 SRSF1Q07955 248 aaKnown RBP eCLIP12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 HSPA14Q0VDF9 509 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 KLRB1Q12918 225 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 GRB7Q14451 532 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 SLC9A5Q14940 896 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 CCSMST1Q4G0I0 132 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 FASTKD1Q53R41 847 aaKnown RBP12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 MLIPQ5VWP3 458 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 IZUMO3Q5VZ72 239 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 FAM198BQ6UWH4 519 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 PACS1Q6VY07 963 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 SYVN1Q86TM6 617 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 TAX1BP1Q86VP1 789 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 APLFQ8IW19 511 aaPredicted RBP12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 SYTL1Q8IYJ3 562 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 TBC1D21Q8IYX1 336 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 CARFQ8N187 725 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 TXLNBQ8N3L3 684 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 ADAMTS17Q8TE56 1095 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 RANBP9Q96S59 729 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 AP1M1Q9BXS5 423 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 ING2Q9H160 280 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 TCFL5Q9UL49 500 aa12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 DRG1Q9Y295 367 aaKnown RBP12.91□□□□□ -0.34
NUDCD3-201ENST00000338427 SPENQ96T58 3664 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 ERI2A8K979 691 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 GOLGA8KD6RF30 607 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 E7EQ34 232 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 H3BMH7 237 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 GOLGA8TH3BQL2 631 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 KRT86O43790 486 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 GPC4O75487 556 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 SNRNP200O75643 2136 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 ZNF189O75820 626 aaPredicted RBP12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 GAS8O95995 478 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 F7P08709 466 aaPredicted RBP12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 GSDMDP57764 484 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 RAPSNQ13702 412 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 TRIP13Q15645 432 aaPredicted RBP12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 CCNG2Q16589 344 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 NADK2Q4G0N4 442 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 SYTL3Q4VX76 610 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 PCID2Q5JVF3 399 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 ZNF385CQ66K41 422 aaPredicted RBP12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 AFTPHQ6ULP2 937 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 DNAJC22Q8N4W6 341 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 ZNF655Q8N720 491 aaPredicted RBP12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 CCDC89Q8N998 374 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 C19orf47Q8N9M1 422 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 LINC01555Q8NAE3 123 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 OR5K2Q8NHB8 316 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 LRFN5Q96NI6 719 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 MFRPQ9BY79 579 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 NLNQ9BYT8 704 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 SLC7A5P2Q9GIP4 190 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 PAK5Q9P286 719 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 DHCR7Q9UBM7 475 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 TSR3Q9UJK0 312 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 SNX7Q9UNH6 387 aa12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 RUVBL2Q9Y230 463 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-201ENST00000338427 NFS1Q9Y697 457 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms