RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 DNAJB9Q9UBS3 223 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 A0A0U1RQS6 177 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 POP7O75817 140 aaKnown RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 BMP10O95393 424 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 CD70P32970 193 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 HTR6P50406 440 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 FOXM1Q08050 763 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 CCNYL2Q5T2Q4 361 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 LRRC70Q7Z2Q7 622 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 UTP4Q969X6 686 aaKnown RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF382Q96SR6 550 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 SORT1Q99523 831 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 HERC2P3Q9BVR0 1158 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 TRIM8Q9BZR9 551 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 EPS8L2Q9H6S3 715 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ANGPT4Q9Y264 503 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 RP1P56715 2156 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 SUV39H1O43463 412 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 DYRK3O43781 588 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 TGFB1P01137 390 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 MTHFD1P11586 935 aaKnown RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SLC6A2P23975 617 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 GRIK2Q13002 908 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 TOP3AQ13472 1001 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 DDHD1Q8NEL9 900 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 OR52B6Q8NGF0 335 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SCRN2Q96FV2 425 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 HHIPL1Q96JK4 782 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 MRPS26Q9BYN8 205 aaKnown RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 TLR9Q9NR96 1032 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SMPD3Q9NY59 655 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 ZIM2Q9NZV7 527 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 ERVW-1Q9UQF0 538 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 NRAPQ86VF7 1730 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SMAD6O43541 496 aaKnown RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 TGM5O43548 720 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 AHCYL1O43865 530 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 PRKD3O94806 890 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 MTHFRP42898 656 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 DAB2P98082 770 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 NADSYN1Q6IA69 706 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 HIPK1Q86Z02 1210 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SLC39A11Q8N1S5 342 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 ZFP28Q8NHY6 868 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 L3HYPDHQ96EM0 354 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 PKP2Q99959 881 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 RALGAPA1Q6GYQ0 2036 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 UPK3BL1B0FP48 263 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 UPK3BL2E5RIL1 263 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 KRT75O95678 551 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 KELP23276 732 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 HDDC3Q8N4P3 179 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 OR13J1Q8NGT2 312 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 TSPEARQ8WU66 669 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 RIMKLBQ9ULI2 386 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SLC27A6Q9Y2P4 619 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 ARCN1P48444 511 aaKnown RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 CCR3P51677 355 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 TMEM214Q6NUQ4 689 aaKnown RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 RAD9AQ99638 391 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 MARCH5Q9NX47 278 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 PTGDR2Q9Y5Y4 395 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SRCP12931 536 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 PRPS1L1P21108 318 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 BROXQ5VW32 411 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 TRIM69Q86WT6 500 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 IL23AQ9NPF7 189 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 AASDHPPTQ9NRN7 309 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 PPP6CO00743 305 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 TNNI3P19429 210 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 HOXD9P28356 352 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 BMPR1AP36894 532 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 NEK2P51955 445 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 RFX4Q33E94 735 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 PGBD5Q8N414 524 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 C12orf76Q8N812 135 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 TERB1Q8NA31 727 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 AIF1LQ9BQI0 150 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 MANBAO00462 879 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 BPIP17213 487 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF10P21506 573 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 COL4A5P29400 1685 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SF1Q15637 639 aaKnown RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SLC2A7Q6PXP3 512 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SYVN1Q86TM6 617 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 C11orf65Q8NCR3 313 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SRFBP1Q8NEF9 429 aaKnown RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SLC29A3Q9BZD2 475 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 MTG2Q9H4K7 406 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 C8orf4Q9NR00 106 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 URADA6NGE7 173 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 ARPC2O15144 300 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 HLA-EP13747 358 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 WDR5P61964 334 aaKnown RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 CYP4F3Q08477 520 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 HEPACAMQ14CZ8 416 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SPATA5L1Q9BVQ7 753 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 TTLL2Q9BWV7 592 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 GSTO2Q9H4Y5 243 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 KRT84Q9NSB2 600 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms