RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ERP27Q96DN0 273 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 PDXPQ96GD0 296 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 CCDC138Q96M89 665 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 CDK15Q96Q40 435 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 UHRF1Q96T88 793 aaPredicted RBP14.32□□□□□ -0.12
CBX3-201ENST00000337620 PKP4Q99569 1192 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 TIMM29Q9BSF4 260 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 MYLK2Q9H1R3 596 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 ZFP69BQ9UJL9 534 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 DMTF1Q9Y222 760 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 CFAP20Q9Y6A4 193 aaKnown RBP14.32□□□□□ -0.12
CBX3-201ENST00000337620 TRPC5OSA6NMA1 111 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 IFRD1O00458 451 aaPredicted RBP14.32□□□□□ -0.12
CBX3-201ENST00000337620 OR7A17O14581 309 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 KATNA1O75449 491 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 ESRRBO95718 433 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 PDGFBP01127 241 aaPredicted RBP14.32□□□□□ -0.12
CBX3-201ENST00000337620 FGF4P08620 206 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 EPB42P16452 691 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 GGT5P36269 586 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 CLCNKAP51800 687 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 CCNG1P51959 295 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 HNRNPH2P55795 449 aaKnown RBP14.32□□□□□ -0.12
CBX3-201ENST00000337620 TCEA2Q15560 299 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 ZXDCQ2QGD7 858 aaPredicted RBP14.32□□□□□ -0.12
CBX3-201ENST00000337620 PTCHD3Q3KNS1 767 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 GPRIN3Q6ZVF9 776 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 OR13H1Q8NG92 308 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 TFGQ92734 400 aaPredicted RBP14.32□□□□□ -0.12
CBX3-201ENST00000337620 SKA1Q96BD8 255 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 FBXL8Q96CD0 374 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 SCARF2Q96GP6 870 aaPredicted RBP14.32□□□□□ -0.12
CBX3-201ENST00000337620 SLC32A1Q9H598 525 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 ZNF225Q9UK10 706 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 ACSL5Q9ULC5 683 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 TIMM22Q9Y584 194 aa14.32□□□□□ -0.12
CBX3-201ENST00000337620 A0A1W2PPC4 97 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 PI15O43692 258 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 WDR47O94967 919 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 OR4F21O95013 312 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 SLC35G4P0C7Q5 338 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 RABIFP47224 123 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 BTKQ06187 659 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 DMTNQ08495 405 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 DMPKQ09013 629 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 TUBB3Q13509 450 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 NXNQ6DKJ4 435 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 METTL2BQ6P1Q9 378 aaKnown RBP14.31□□□□□ -0.12
CBX3-201ENST00000337620 ATL1Q8WXF7 558 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 OR2M4Q96R27 311 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 OR52B2Q96RD2 323 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 ZNF382Q96SR6 550 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 TCF7L2Q9NQB0 619 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 STOX2Q9P2F5 926 aaPredicted RBP14.31□□□□□ -0.12
CBX3-201ENST00000337620 KLQ9UEF7 1012 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 DNAJC15Q9Y5T4 150 aa14.31□□□□□ -0.12
CBX3-201ENST00000337620 FCHO1O14526 889 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 UBOX5O94941 541 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 SLC16A8O95907 504 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 OTCP00480 354 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 ITPKAP23677 461 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 PKNOX1P55347 436 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 ERVPABLB-1P60509 514 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 UGT3A2Q3SY77 523 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 TTC23LQ6PF05 361 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 AGTRAPQ6RW13 159 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 UNC5DQ6UXZ4 953 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 ACAD11Q709F0 780 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 MILR1Q7Z6M3 343 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 ABI3BPQ7Z7G0 1075 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 CDYL2Q8N8U2 506 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 SNX31Q8N9S9 440 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 FBXO15Q8NCQ5 510 aaPredicted RBP14.3□□□□□ -0.12
CBX3-201ENST00000337620 OR5AR1Q8NGP9 310 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 MED8Q96G25 268 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 PRR11Q96HE9 360 aaPredicted RBP14.3□□□□□ -0.12
CBX3-201ENST00000337620 NMUR2Q9GZQ4 415 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 AASDHPPTQ9NRN7 309 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 SLC22A14Q9Y267 594 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 WDR37Q9Y2I8 494 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 TDRKHQ9Y2W6 561 aaKnown RBP14.3□□□□□ -0.12
CBX3-201ENST00000337620 E9PBE3 544 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 AXIN1O15169 862 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 KLHL41O60662 606 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 KCNJ13O60928 360 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 NCF2P19878 526 aaPredicted RBP14.3□□□□□ -0.12
CBX3-201ENST00000337620 IDSP22304 550 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 NUDT1P36639 197 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 SLC6A12P48065 614 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 PIK3CGP48736 1102 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 SRP54P61011 504 aaKnown RBP14.3□□□□□ -0.12
CBX3-201ENST00000337620 RPL6Q02878 288 aaKnown RBP14.3□□□□□ -0.12
CBX3-201ENST00000337620 PRKG2Q13237 762 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 NAE1Q13564 534 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 KANK2Q63ZY3 851 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 LETMD1Q6P1Q0 360 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 LRRC70Q7Z2Q7 622 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 CLNKQ7Z7G1 428 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 HID1Q8IV36 788 aa14.3□□□□□ -0.12
CBX3-201ENST00000337620 PPFIBP2Q8ND30 876 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms