RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 DLGAP1O14490 977 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 DENRO43583 198 aaKnown RBP8.64□□□□□ -1.03
SNCA-201ENST00000336904 TSPAN6O43657 245 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 ADH1AP07327 375 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 LINC00271P0C7V0 271 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 VARSP26640 1264 aaKnown RBP8.64□□□□□ -1.03
SNCA-201ENST00000336904 PCSK6P29122 969 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 IL1RL1Q01638 556 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 ARHGEF6Q15052 776 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 GRAMD4Q6IC98 578 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 FAM109BQ6ICB4 259 aaPredicted RBP8.64□□□□□ -1.03
SNCA-201ENST00000336904 OGFOD2Q6N063 350 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 CERS6Q6ZMG9 384 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 CHERPQ8IWX8 916 aaKnown RBP8.64□□□□□ -1.03
SNCA-201ENST00000336904 IRF7Q92985 503 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 OR52E6Q96RD3 313 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 CGREF1Q99674 301 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 CCT7Q99832 543 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 CHID1Q9BWS9 393 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 CFHR5Q9BXR6 569 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 BRINP2Q9C0B6 783 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 Q9H521 79 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 LRTM1Q9HBL6 345 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 PFDN4Q9NQP4 134 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 CCM2LQ9NUG4 571 aaPredicted RBP8.64□□□□□ -1.03
SNCA-201ENST00000336904 LIMD1Q9UGP4 676 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 RAB26Q9ULW5 256 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 NEUROG3Q9Y4Z2 214 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 DGKBQ9Y6T7 804 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 KIAA1671Q9BY89 1806 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 SCN8AQ9UQD0 1980 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 GON4LQ3T8J9 2241 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.64□□□□□ -1.03
SNCA-201ENST00000336904 IFRD1O00458 451 aaPredicted RBP8.64□□□□□ -1.03
SNCA-201ENST00000336904 ANKRD28O15084 1053 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 SNUPNO95149 360 aaKnown RBP8.64□□□□□ -1.03
SNCA-201ENST00000336904 TIMP1P01033 207 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 IL10P22301 178 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 FASP25445 335 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 WASP42768 502 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 NSG1P42857 185 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 RECQLP46063 649 aaPredicted RBP8.64□□□□□ -1.03
SNCA-201ENST00000336904 SPINT3P49223 89 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 SLC7A9P82251 487 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 TRAP1Q12931 704 aaKnown RBP8.64□□□□□ -1.03
SNCA-201ENST00000336904 MTA1Q13330 715 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 GRM2Q14416 872 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 INPP5AQ14642 412 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 PCBP2Q15366 365 aaKnown RBP eCLIP8.64□□□□□ -1.03
SNCA-201ENST00000336904 LILRA6Q6PI73 481 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 GDPD4Q6W3E5 623 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 TRIML2Q8N7C3 387 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 PDPRQ8NCN5 879 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 ZFP28Q8NHY6 868 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 SLC13A3Q8WWT9 602 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 MYOCQ99972 504 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 EFHD1Q9BUP0 239 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 HTATIP2Q9BUP3 242 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 NUSAP1Q9BXS6 441 aaKnown RBP8.64□□□□□ -1.03
SNCA-201ENST00000336904 ELOVL6Q9H5J4 265 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 SMURF2Q9HAU4 748 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 ZDHHC3Q9NYG2 299 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 CCL27Q9Y4X3 112 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 PTPRSQ13332 1948 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 GRM6O15303 877 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 BCKDHAP12694 445 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 XPAP23025 273 aaPredicted RBP8.64□□□□□ -1.03
SNCA-201ENST00000336904 PSMD8P48556 350 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 PIGFQ07326 219 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 ACOX1Q15067 660 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 MAPKAPK3Q16644 382 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 IER5LQ5T953 404 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 ZNF783Q6ZMS7 281 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 MSRB3Q8IXL7 192 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 OR7A2PQ8NGA2 310 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 NXPE3Q969Y0 559 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 RSPRY1Q96DX4 576 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 MPP4Q96JB8 637 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 ZNF597Q96LX8 424 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 SAMD11Q96NU1 681 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 DPH2Q9BQC3 489 aaPredicted RBP8.64□□□□□ -1.03
SNCA-201ENST00000336904 C1QTNF3Q9BXJ4 246 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 OCEL1Q9H607 264 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 SPHK2Q9NRA0 654 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 AGPAT4Q9NRZ5 378 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 ACTR3BQ9P1U1 418 aa8.64□□□□□ -1.03
SNCA-201ENST00000336904 CFAP20Q9Y6A4 193 aaKnown RBP8.64□□□□□ -1.03
SNCA-201ENST00000336904 NUMA1Q14980 2115 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 TRBV5-4A0A0C4DH59 114 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 TCRBV5S2A0A599 114 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 E7EQ34 232 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 VILLO15195 856 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 GSTA4O15217 222 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 TLL1O43897 1013 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 ABCB1P08183 1280 aaPredicted RBP8.63□□□□□ -1.03
SNCA-201ENST00000336904 ANXA5P08758 320 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 HSD17B1P14061 328 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 ELK4P28324 431 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 AQP1P29972 269 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 SLC6A11P48066 632 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms