RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 GRXCR2A6NFK2 248 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 ARHGEF33A8MVX0 844 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 LOC730098B7Z3J9 87 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 GPR89AB7ZAQ6 455 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 LSM1O15116 133 aaKnown RBP13.16□□□□□ -0.3
LMO1-201ENST00000335790 INPP4BO15327 924 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 MID1O15344 667 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 UGDHO60701 494 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 FKBP6O75344 327 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 CLDN9O95484 217 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 CATP04040 527 aaKnown RBP13.16□□□□□ -0.3
LMO1-201ENST00000335790 GPR89BP0CG08 455 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 PRPH2P23942 346 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 NTSR1P30989 418 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 CTHP32929 405 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 ZFP36L2P47974 494 aaKnown RBP13.16□□□□□ -0.3
LMO1-201ENST00000335790 RPS14P62263 151 aaKnown RBP13.16□□□□□ -0.3
LMO1-201ENST00000335790 TFF2Q03403 129 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 ART3Q13508 389 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 E2F2Q14209 437 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 SKIV2LQ15477 1246 aaKnown RBP13.16□□□□□ -0.3
LMO1-201ENST00000335790 ZNF423Q2M1K9 1284 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 PTCHD3Q3KNS1 767 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 TCHHL1Q5QJ38 904 aaPredicted RBP13.16□□□□□ -0.3
LMO1-201ENST00000335790 C1orf146Q5VVC0 180 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 RAET1GQ6H3X3 334 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 PNCKQ6P2M8 343 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 PAOXQ6QHF9 649 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 BLOC1S3Q6QNY0 202 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 C11orf96Q7Z7L8 435 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 RALGPS2Q86X27 583 aaPredicted RBP13.16□□□□□ -0.3
LMO1-201ENST00000335790 CHPFQ8IZ52 775 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 SFRP1Q8N474 314 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 OR2L2Q8NH16 312 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 HM13Q8TCT9 377 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 HIC2Q96JB3 615 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 PPP3R2Q96LZ3 170 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 CDK15Q96Q40 435 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 DPEP2Q9H4A9 486 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 CD248Q9HCU0 757 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 MRPL40Q9NQ50 206 aaKnown RBP13.16□□□□□ -0.3
LMO1-201ENST00000335790 DNAJC11Q9NVH1 559 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 STX18Q9P2W9 335 aaKnown RBP13.16□□□□□ -0.3
LMO1-201ENST00000335790 ATXN10Q9UBB4 475 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 GIMAP2Q9UG22 337 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 POMPQ9Y244 141 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 PCDHGA7Q9Y5G6 932 aa13.16□□□□□ -0.3
LMO1-201ENST00000335790 KLHL33A6NCF5 533 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 PABPN1LA6NDY0 278 aaKnown RBP13.15□□□□□ -0.3
LMO1-201ENST00000335790 MANBAO00462 879 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 MRASO14807 208 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 TRIM23P36406 574 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 DPP6P42658 865 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 SOX9P48436 509 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 DIO3P55073 304 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 PFN3P60673 137 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 RPA4Q13156 261 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 GTF2H3Q13889 308 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 RCAN2Q14206 197 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 ABRAXAS2Q15018 415 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 KIF19Q2TAC6 998 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 SYTL3Q4VX76 610 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 ATP6AP1LQ52LC2 224 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 TMEM196Q5HYL7 178 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.15□□□□□ -0.3
LMO1-201ENST00000335790 WLSQ5T9L3 541 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 NEK5Q6P3R8 708 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 IL27RAQ6UWB1 636 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 ZNF547Q8IVP9 402 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 OXR1Q8N573 874 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 PCYOX1LQ8NBM8 494 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 OR9I1Q8NGQ6 314 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 OR56A3Q8NH54 315 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 ANKRD27Q96NW4 1050 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 NPAS2Q99743 824 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 LRFN3Q9BTN0 628 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 C1QTNF2Q9BXJ5 285 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 TEX101Q9BY14 249 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 OR2AG1Q9H205 316 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 C8orf33Q9H7E9 229 aaPredicted RBP13.15□□□□□ -0.3
LMO1-201ENST00000335790 NOP53Q9NZM5 478 aaKnown RBP13.15□□□□□ -0.3
LMO1-201ENST00000335790 SCML1Q9UN30 329 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 RNF11Q9Y3C5 154 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 L3MBTL1Q9Y468 752 aa13.15□□□□□ -0.3
LMO1-201ENST00000335790 MGAT4DA6NG13 374 aa13.14□□□□□ -0.31
LMO1-201ENST00000335790 IGLON5A6NGN9 336 aa13.14□□□□□ -0.31
LMO1-201ENST00000335790 H3BM21 787 aa13.14□□□□□ -0.31
LMO1-201ENST00000335790 ANKRD28O15084 1053 aa13.14□□□□□ -0.31
LMO1-201ENST00000335790 RGS14O43566 566 aa13.14□□□□□ -0.31
LMO1-201ENST00000335790 SYNCRIPO60506 623 aaKnown RBP13.14□□□□□ -0.31
LMO1-201ENST00000335790 ULK1O75385 1050 aa13.14□□□□□ -0.31
LMO1-201ENST00000335790 KRT36O76013 467 aa13.14□□□□□ -0.31
LMO1-201ENST00000335790 C1orf105O95561 183 aa13.14□□□□□ -0.31
LMO1-201ENST00000335790 KRT6AP02538 564 aa13.14□□□□□ -0.31
LMO1-201ENST00000335790 KRT6BP04259 564 aa13.14□□□□□ -0.31
LMO1-201ENST00000335790 ACPPP15309 386 aa13.14□□□□□ -0.31
LMO1-201ENST00000335790 ZNF8P17098 575 aaPredicted RBP13.14□□□□□ -0.31
LMO1-201ENST00000335790 CAPN3P20807 821 aa13.14□□□□□ -0.31
LMO1-201ENST00000335790 MAP4P27816 1152 aaKnown RBP13.14□□□□□ -0.31
LMO1-201ENST00000335790 ACADLP28330 430 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms