RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 PCSK9Q8NBP7 692 aaKnown RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ASB12Q8WXK4 309 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 CPB2Q96IY4 423 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 DUSP9Q99956 384 aaKnown RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 KATNBL1Q9H079 304 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 COL3A1P02461 1466 aaPredicted RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 SNAP29O95721 258 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 GMPRP36959 345 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 MTM1Q13496 603 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 RAPSNQ13702 412 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF267Q14586 743 aaPredicted RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 EMC10Q5UCC4 262 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 CCSAPQ6IQ19 270 aaPredicted RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PARP8Q8N3A8 854 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 OR5T3Q8NGG3 340 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 LPGAT1Q92604 370 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 NECAB3Q96P71 396 aaPredicted RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 CDC6Q99741 560 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 POLR2J2Q9GZM3 115 aaKnown RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 TUBB1Q9H4B7 451 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 COQ10BQ9H8M1 238 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ST14Q9Y5Y6 855 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 A8MUI8 341 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 GTF2F2P13984 249 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 BMP6P22004 513 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 FECHP22830 423 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 HTR2BP41595 481 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 NOMO1Q15155 1222 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 LDLRAP1Q5SW96 308 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ARHGAP11AQ6P4F7 1023 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 GALNT5Q7Z7M9 940 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 SVBPQ8N300 66 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF709Q8N972 641 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 CD300LFQ8TDQ1 290 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 OTUB2Q96DC9 234 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 LINGO1Q96FE5 620 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ZFP14Q9HCL3 533 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 FANCFQ9NPI8 374 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 TESMINQ9Y4I5 508 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 DIP2CQ9Y2E4 1556 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 FAM208AQ9UK61 1670 aaKnown RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PHYHO14832 338 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 NDST1P52848 882 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ARF3P61204 181 aaPredicted RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ARF1P84077 181 aaKnown RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 NPTX1Q15818 432 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 LRIF1Q5T3J3 769 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PAOXQ6QHF9 649 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 LRRC57Q8N9N7 239 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 GPRC5AQ8NFJ5 357 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 STON2Q8WXE9 905 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 AZIN2Q96A70 460 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 MFSD14AQ96MC6 490 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 TKTL2Q9H0I9 626 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ASB8Q9H765 288 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 FBXL21Q9UKT6 434 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PADI2Q9Y2J8 665 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 IFT52Q9Y366 437 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ARPC2O15144 300 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 EIF2DP41214 584 aaKnown RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 S100A10P60903 97 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 GAS6Q14393 721 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 RALGPS1Q5JS13 557 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF433Q8N7K0 673 aaPredicted RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF563Q8TA94 476 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PXMP2Q9NR77 195 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 MAT2BQ9NZL9 334 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 MGAT4BQ9UQ53 548 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 XPNPEP2O43895 674 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 MT-ND5P03915 603 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF20P17024 532 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 MECP2P51608 486 aaKnown RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 DEFA6Q01524 100 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 C1orf186Q6ZWK4 172 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 APTXQ7Z2E3 356 aaKnown RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 CIR1Q86X95 450 aaPredicted RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 FAM46DQ8NEK8 389 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 AGBL3Q8NEM8 1001 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ELP5Q8TE02 316 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PIGBQ92521 554 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 CYP2S1Q96SQ9 504 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 TBC1D17Q9HA65 648 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 SLC12A8A0AV02 714 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 EFCAB7A8K855 629 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 KRBOX1C9JBD0 128 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 E5RJQ4 531 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PROM1O43490 865 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 STK16O75716 305 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 SOX30O94993 753 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PRKACAP17612 351 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 CD47Q08722 323 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 RALGDSQ12967 914 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PTCHD3Q3KNS1 767 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 GNASQ5JWF2 1037 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 DPY19L3Q6ZPD9 716 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 DGLUCYQ7Z3D6 616 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 CAND1Q86VP6 1230 aaKnown RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 C12orf40Q86WS4 652 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 GHDCQ8N2G8 530 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 SMURF1Q9HCE7 757 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms