RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 NHLH1Q02575 133 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 TTLL9Q3SXZ7 439 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 LVRNQ6Q4G3 990 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 ABRAXAS1Q6UWZ7 409 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 FAM20CQ8IXL6 584 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 NKAPQ8N5F7 415 aaKnown RBP16.07■□□□□ 0.16
SHOX-201ENST00000334060 PRR11Q96HE9 360 aaPredicted RBP16.07■□□□□ 0.16
SHOX-201ENST00000334060 PKP4Q99569 1192 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 MENTQ9BUN1 341 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 TSSK1BQ9BXA7 367 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 PLLPQ9Y342 182 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 G3V2L1 256 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 SIX3O95343 332 aaPredicted RBP16.07■□□□□ 0.16
SHOX-201ENST00000334060 GSTM1P09488 218 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 ZNF806P0C7X5 589 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 MTHFD1P11586 935 aaKnown RBP16.07■□□□□ 0.16
SHOX-201ENST00000334060 KCNA4P22459 653 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 CRHR1P34998 444 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 ARRB1P49407 418 aaPredicted RBP16.07■□□□□ 0.16
SHOX-201ENST00000334060 GSTM4Q03013 218 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 ELOCQ15369 112 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 SFRP1Q8N474 314 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 EID2Q8N6I1 236 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 ACMSDQ8TDX5 336 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 KIAA1191Q96A73 305 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 SKA1Q96BD8 255 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 PYCR2Q96C36 320 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 FERD3LQ96RJ6 166 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 NMRAL1Q9HBL8 299 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 ABCF3Q9NUQ8 709 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 PCOLCE2Q9UKZ9 415 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 SIGLEC6O43699 453 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 RGS4P49798 205 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 MNAT1P51948 309 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 PPP1CAP62136 330 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 TGFBIQ15582 683 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 PHF21BQ96EK2 531 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 PDLIM5Q96HC4 596 aaKnown RBP16.06■□□□□ 0.16
SHOX-201ENST00000334060 ATG10Q9H0Y0 220 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 ZNF395Q9H8N7 513 aaPredicted RBP16.06■□□□□ 0.16
SHOX-201ENST00000334060 NCDNQ9UBB6 729 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 ACSL5Q9ULC5 683 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 DOLKQ9UPQ8 538 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 TAPBPO15533 448 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 DLX3O60479 287 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 SLC16A8O95907 504 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 MPC1LP0DKB6 136 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 VCLP18206 1134 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 TSPAN8P19075 237 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 ARRB2P32121 409 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 UBE2IP63279 158 aaKnown RBP16.06■□□□□ 0.16
SHOX-201ENST00000334060 GPR18Q14330 331 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 PCLAFQ15004 111 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 FAM83EQ2M2I3 478 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 TTC19Q6DKK2 380 aaPredicted RBP16.06■□□□□ 0.16
SHOX-201ENST00000334060 ZCCHC23Q6ZST2 131 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 ZNF438Q7Z4V0 828 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 ARL14Q8N4G2 192 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 LINC01555Q8NAE3 123 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 OR52E1Q8NGJ3 308 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 CABS1Q96KC9 395 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 PPM1MQ96MI6 270 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 TMEM79Q9BSE2 394 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 EDEM2Q9BV94 578 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 TBC1D10AQ9BXI6 508 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 KLHL42Q9P2K6 505 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 RNF112Q9ULX5 631 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 SH2B3Q9UQQ2 575 aa16.06■□□□□ 0.16
SHOX-201ENST00000334060 A0A1B0GTL3 188 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 PPP6CO00743 305 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 KPNA5O15131 536 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 NRP2O60462 931 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 GLRA3O75311 464 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 ANXA6P08133 673 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 CBSLP0DN79 551 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 ENO3P13929 434 aaPredicted RBP16.05■□□□□ 0.16
SHOX-201ENST00000334060 PSMB5P28074 263 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 CBSP35520 551 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 CCT8P50990 548 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 RPA4Q13156 261 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 ACAP2Q15057 778 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 AGAP9Q5VTM2 703 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 SUSD1Q6UWL2 747 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 OR5K2Q8NHB8 316 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 NSUN5Q96P11 429 aaKnown RBP16.05■□□□□ 0.16
SHOX-201ENST00000334060 SLC12A9Q9BXP2 914 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 SLC40A1Q9NP59 571 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 CPNE7Q9UBL6 633 aa16.05■□□□□ 0.16
SHOX-201ENST00000334060 SUPT3HB4E1H0 165 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 SUPT3HO75486 399 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 KIAA0754O94854 1291 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 HNRNPH1P31943 449 aaKnown RBP16.04■□□□□ 0.16
SHOX-201ENST00000334060 RPIAP49247 311 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 PFKFB4Q16877 469 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 FOXR1Q6PIV2 292 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 GKN2Q86XP6 184 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 C10orf107Q8IVU9 208 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 GPR156Q8NFN8 814 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 PRRX2Q99811 253 aa16.04■□□□□ 0.16
SHOX-201ENST00000334060 TFB2MQ9H5Q4 396 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms