RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ZNF540Q8NDQ6 660 aa23.14■■□□□ 1.3
TSKU-201ENST00000333090 SETD9Q8NE22 299 aa23.14■■□□□ 1.3
TSKU-201ENST00000333090 KLHDC9Q8NEP7 349 aa23.14■■□□□ 1.3
TSKU-201ENST00000333090 LPCAT1Q8NF37 534 aa23.14■■□□□ 1.3
TSKU-201ENST00000333090 PHF10Q8WUB8 498 aaKnown RBP23.14■■□□□ 1.3
TSKU-201ENST00000333090 FBLIM1Q8WUP2 373 aa23.14■■□□□ 1.3
TSKU-201ENST00000333090 RMND5AQ9H871 391 aa23.14■■□□□ 1.3
TSKU-201ENST00000333090 A8MU76 341 aa23.14■■□□□ 1.29
TSKU-201ENST00000333090 TTC34A8MYJ7 566 aa23.14■■□□□ 1.29
TSKU-201ENST00000333090 OTCP00480 354 aa23.14■■□□□ 1.29
TSKU-201ENST00000333090 SERPINB1P30740 379 aa23.14■■□□□ 1.29
TSKU-201ENST00000333090 PCYT1AP49585 367 aa23.14■■□□□ 1.29
TSKU-201ENST00000333090 YBEYP58557 167 aaPredicted RBP23.14■■□□□ 1.29
TSKU-201ENST00000333090 SELENBP1Q13228 472 aa23.14■■□□□ 1.29
TSKU-201ENST00000333090 PTPRRQ15256 657 aa23.14■■□□□ 1.29
TSKU-201ENST00000333090 SMN1Q16637 294 aaKnown RBP23.14■■□□□ 1.29
TSKU-201ENST00000333090 FAM110CQ1W6H9 321 aa23.14■■□□□ 1.29
TSKU-201ENST00000333090 RUNDC3AQ59EK9 446 aa23.14■■□□□ 1.29
TSKU-201ENST00000333090 OR52E6Q96RD3 313 aa23.14■■□□□ 1.29
TSKU-201ENST00000333090 BTBD2Q9BX70 525 aa23.14■■□□□ 1.29
TSKU-201ENST00000333090 KAT8Q9H7Z6 458 aaKnown RBP23.14■■□□□ 1.29
TSKU-201ENST00000333090 FARSBQ9NSD9 589 aaKnown RBP23.14■■□□□ 1.29
TSKU-201ENST00000333090 SCN3BQ9NY72 215 aa23.14■■□□□ 1.29
TSKU-201ENST00000333090 POU2F3Q9UKI9 436 aa23.14■■□□□ 1.29
TSKU-201ENST00000333090 PKP3Q9Y446 797 aa23.14■■□□□ 1.29
TSKU-201ENST00000333090 GLTPD2A6NH11 291 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 HSPA7P48741 367 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 TRAF3Q13114 568 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 GTF2H3Q13889 308 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 ZC3H12BQ5HYM0 836 aaKnown RBP23.13■■□□□ 1.29
TSKU-201ENST00000333090 CES5AQ6NT32 575 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 TAS2R42Q7RTR8 314 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 OR7D4Q8NG98 312 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 KCNJ9Q92806 393 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 FAM120BQ96EK7 910 aaKnown RBP23.13■■□□□ 1.29
TSKU-201ENST00000333090 DUSP21Q9H596 190 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 NSUN3Q9H649 340 aaKnown RBP23.13■■□□□ 1.29
TSKU-201ENST00000333090 PDFQ9HBH1 243 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 ABCB10Q9NRK6 738 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 SLC12A8A0AV02 714 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 DRGXA6NNA5 263 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 CELF2O95319 508 aaKnown RBP23.13■■□□□ 1.29
TSKU-201ENST00000333090 ITGAMP11215 1152 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 NRIP1P48552 1158 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 PCBP2Q15366 365 aaKnown RBP eCLIP23.13■■□□□ 1.292e-9■■■■■ 27.5
TSKU-201ENST00000333090 C10orf120Q5SQS8 335 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 SYT6Q5T7P8 510 aaPredicted RBP23.13■■□□□ 1.29
TSKU-201ENST00000333090 PLD3Q8IV08 490 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 HTRA1Q92743 480 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 PARK7Q99497 189 aaKnown RBP23.13■■□□□ 1.29
TSKU-201ENST00000333090 SPON2Q9BUD6 331 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 KATNAL1Q9BW62 490 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 MAGIXQ9H6Y5 334 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 MARCH2Q9P0N8 246 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 CCL27Q9Y4X3 112 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 TNPO3Q9Y5L0 923 aaKnown RBP23.13■■□□□ 1.29
TSKU-201ENST00000333090 PATJQ8NI35 1801 aa23.13■■□□□ 1.29
TSKU-201ENST00000333090 LPOP22079 712 aaPredicted RBP23.12■■□□□ 1.29
TSKU-201ENST00000333090 CD40LGP29965 261 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 VARS2Q5ST30 1063 aaKnown RBP23.12■■□□□ 1.29
TSKU-201ENST00000333090 DEPDC1Q5TB30 811 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 SPRYD7Q5W111 196 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 CPZQ66K79 652 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 CHPFQ8IZ52 775 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 OR52E4Q8NGH9 312 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 LGALS12Q96DT0 336 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 SUSD3Q96L08 255 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 SLIRPQ9GZT3 109 aaKnown RBP23.12■■□□□ 1.29
TSKU-201ENST00000333090 DSN1Q9H410 356 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 S100BP04271 92 aaPredicted RBP23.12■■□□□ 1.29
TSKU-201ENST00000333090 GSNP06396 782 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 GRK3P35626 688 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 TUSC3Q13454 348 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 ZDHHC21Q8IVQ6 265 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 SLX1AQ9BQ83 275 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 MGME1Q9BQP7 344 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 CINPQ9BW66 212 aaPredicted RBP23.12■■□□□ 1.29
TSKU-201ENST00000333090 AP5M1Q9H0R1 490 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 FBXO44Q9H4M3 255 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 ATP11BQ9Y2G3 1177 aa23.12■■□□□ 1.29
TSKU-201ENST00000333090 MYO1GB0I1T2 1018 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 RGS14O43566 566 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 RECQL5O94762 991 aaPredicted RBP23.11■■□□□ 1.29
TSKU-201ENST00000333090 IL6P05231 212 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 MYCLP1P12525 358 aaPredicted RBP23.11■■□□□ 1.29
TSKU-201ENST00000333090 GSSP48637 474 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 HUNKP57058 714 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 ARMC8Q8IUR7 673 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 LGI2Q8N0V4 545 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 PYURFQ96I23 114 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 PCDHGC4Q9Y5F7 938 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 GMPPBQ9Y5P6 360 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 FFAR2O15552 330 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 SEC22BO75396 215 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 JUNDP17535 347 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 GDF5P43026 501 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 CLK3P49761 638 aaKnown RBP23.11■■□□□ 1.29
TSKU-201ENST00000333090 MTA1Q13330 715 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 CARD16Q5EG05 197 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 SHQ1Q6PI26 577 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms