RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 TRIM77I1YAP6 450 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 VPS4BO75351 444 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 BEST1O76090 585 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 CD4P01730 458 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 TARDBPQ13148 414 aaKnown RBP eCLIP17.8■□□□□ 0.44
PKP3-201ENST00000331563 SMN1Q16637 294 aaKnown RBP17.8■□□□□ 0.44
PKP3-201ENST00000331563 WSCD1Q658N2 575 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 KIAA0930Q6ICG6 404 aaPredicted RBP17.8■□□□□ 0.44
PKP3-201ENST00000331563 ERAP2Q6P179 960 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 HASPINQ8TF76 798 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 REXO5Q96IC2 774 aaKnown RBP17.8■□□□□ 0.44
PKP3-201ENST00000331563 TBCDQ9BTW9 1192 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 ACAT2Q9BWD1 397 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 C14orf119Q9NWQ9 140 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 BTBD3Q9Y2F9 522 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 METTL15A6NJ78 407 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 A8MX80 341 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 ASGR1P07306 291 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 CYBAP13498 195 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 FCGRTP55899 365 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 SLC35A2P78381 396 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 ZNF45Q02386 682 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 NKG7Q16617 165 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 HFE2Q6ZVN8 426 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 BNIPLQ7Z465 357 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 ZNF438Q7Z4V0 828 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 FAM126BQ8IXS8 530 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 OR2T12Q8NG77 320 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 KATNAL1Q9BW62 490 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 ENTPD7Q9NQZ7 604 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 RASSF1Q9NS23 344 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 SNX6Q9UNH7 406 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 KRT87PA6NCN2 255 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 CASTOR2A6NHX0 329 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 AP3D1O14617 1153 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 CA12O43570 354 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 GGT1P19440 569 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 IGFBP5P24593 272 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 THPOP40225 353 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 CDC42EP1Q00587 391 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 LAPTM4AQ15012 233 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 KCNA10Q16322 511 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 SPANXN2Q5MJ10 180 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 AHSA2Q719I0 299 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 NECAB2Q7Z6G3 386 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 TMEM179BQ7Z7N9 219 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 APPL2Q8NEU8 664 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 DDIT4Q9NX09 232 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 CDH9Q9ULB4 789 aa17.8■□□□□ 0.44
PKP3-201ENST00000331563 PFKLP17858 780 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 DCTP40126 519 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 MRPS6P82932 125 aaKnown RBP17.79■□□□□ 0.44
PKP3-201ENST00000331563 PRKG2Q13237 762 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 NXNL2Q5VZ03 156 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 DENND5AQ6IQ26 1287 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 DET1Q7L5Y6 550 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 OR8H2Q8N162 312 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 CACTIN-AS1Q8N1I8 211 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.79■□□□□ 0.44
PKP3-201ENST00000331563 SH3RF2Q8TEC5 729 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 METTL2AQ96IZ6 378 aaKnown RBP17.79■□□□□ 0.44
PKP3-201ENST00000331563 ST6GAL2Q96JF0 529 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 RGS18Q9NS28 235 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 RNF186Q9NXI6 227 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 FBXO10Q9UK96 956 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 PCDHGB6Q9Y5F9 930 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 TEX51A0A1B0GUA7 166 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 OR5K3A6NET4 321 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 SUPT3HB4E1H0 165 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 IGHA2P01877 340 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 ACVR2AP27037 513 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 CYP2C18P33260 490 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 GGT5P36269 586 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 MLLT6P55198 1093 aaPredicted RBP17.79■□□□□ 0.44
PKP3-201ENST00000331563 FAM214AQ32MH5 1076 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 Q5BKY6 102 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 LRRC52Q8N7C0 313 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 TP53I13Q8NBR0 393 aaPredicted RBP17.79■□□□□ 0.44
PKP3-201ENST00000331563 OR5K1Q8NHB7 308 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 ACOX2Q99424 681 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 DUSP21Q9H596 190 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 TREX1Q9NSU2 369 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 NUP50Q9UKX7 468 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 GMPPBQ9Y5P6 360 aa17.79■□□□□ 0.44
PKP3-201ENST00000331563 LINC00854A0A1B0GVQ3 168 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 DNTTP04053 509 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 CD52P31358 61 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 DDOSTP39656 456 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 TAF6P49848 677 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 B2MP61769 119 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 GALNT3Q14435 633 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 TYSND1Q2T9J0 566 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 TBRG1Q3YBR2 411 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 KIAA0319Q5VV43 1072 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 C3orf58Q8NDZ4 430 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 OR10A6Q8NH74 314 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 NUDT8Q8WV74 236 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 ZNF566Q969W8 418 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 PYCR2Q96C36 320 aa17.78■□□□□ 0.44
PKP3-201ENST00000331563 NDFIP2Q9NV92 336 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms