RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 OR4M1Q8NGD0 313 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 PPP1R13LQ8WUF5 828 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 BTN2A2Q8WVV5 523 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 NT5C3BQ969T7 300 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 NTAN1Q96AB6 310 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 TMEM143Q96AN5 459 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 TMEM74Q96NL1 305 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 TRNT1Q96Q11 434 aaKnown RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 DCLRE1CQ96SD1 692 aaKnown RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 CENPOQ9BU64 300 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 SRRQ9GZT4 340 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 RPF1Q9H9Y2 349 aaKnown RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 RRAGCQ9HB90 399 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 CYP4F12Q9HCS2 524 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 MID1IP1Q9NPA3 183 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 IL1RAPQ9NPH3 570 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 NMRK2Q9NPI5 230 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 NUFIP1Q9UHK0 495 aaKnown RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 AP1M2Q9Y6Q5 423 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 LTBP3Q9NS15 1303 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 A0A0G2JMZ2 1700 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 LRRC37A2A6NM11 1700 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 IQCMA0A1B0GVH7 501 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 ELOVL7A1L3X0 281 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 B4DXG7 233 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 LGI1O95970 557 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 HLA-DQB1P01920 261 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 LCKP06239 509 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 ADORA3P0DMS8 318 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 UROSP10746 265 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 KRT20P35900 424 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 RGS6P49758 472 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 YBX1P67809 324 aaKnown RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 JAG1P78504 1218 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 SEMA3AQ14563 771 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 QPRTQ15274 297 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 TARBP2Q15633 366 aaKnown RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 GARNL3Q5VVW2 1013 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 SHEQ5VZ18 495 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 MAP1SQ66K74 1059 aaPredicted RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 ATG9BQ674R7 924 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 KDELC2Q7Z4H8 507 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 LIMS2Q7Z4I7 341 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 UNC93AQ86WB7 457 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 CHPFQ8IZ52 775 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 RBFAQ8N0V3 343 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 PGBD3Q8N328 593 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 YIPF7Q8N8F6 280 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 FRS2Q8WU20 508 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 CIDECQ96AQ7 238 aaPredicted RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 PYCR2Q96C36 320 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 PHF21BQ96EK2 531 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 C12orf42Q96LP6 360 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 NEDD4LQ96PU5 975 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 FYTTD1Q96QD9 318 aaKnown RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 COPS4Q9BT78 406 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 SPNS1Q9H2V7 528 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 TUBB1Q9H4B7 451 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 SMURF1Q9HCE7 757 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 NOSIPQ9Y314 301 aaKnown RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 FKBP7Q9Y680 259 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 RNF215Q9Y6U7 377 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 V9GYH0 126 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 IGKV6D-21A0A0A0MT36 114 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 FAM220BPB1ANY3 271 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 ATP6V1G2-DDX39BF2Z307 99 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 H0YC42 278 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 AP3D1O14617 1153 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 MAFO75444 373 aaPredicted RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 DDNO94850 711 aaPredicted RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 MLYCDO95822 493 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 MYCLP12524 364 aaPredicted RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 FPR1P21462 350 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 DNAJA1P31689 397 aaKnown RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 HMGCLP35914 325 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 RBP5P82980 135 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 FPGSQ05932 587 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 TCP10Q12799 353 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 ZNF460Q14592 562 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 COL28A1Q2UY09 1125 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 HABP4Q5JVS0 413 aaKnown RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 CLLU1Q5K131 121 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 TMPRSS11AQ6ZMR5 421 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 DDX53Q86TM3 631 aaKnown RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 GPAT4Q86UL3 456 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 STX19Q8N4C7 294 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 CDYL2Q8N8U2 506 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 TTC29Q8NA56 475 aaPredicted RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 ZNF675Q8TD23 568 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 GIMAP5Q96F15 307 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 HRASLS5Q96KN8 279 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 FCRL5Q96RD9 977 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 MCCC1Q96RQ3 725 aaPredicted RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 TBL1YQ9BQ87 522 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 SPATA9Q9BWV2 254 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 GABARAPL3Q9BY60 117 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 TFB2MQ9H5Q4 396 aaKnown RBP8.22□□□□□ -1.09
SKA2-201ENST00000330137 NRBP2Q9NSY0 501 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 INTS7Q9NVH2 962 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms