RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 FBXO38Q6PIJ6 1188 aa26.77■■□□□ 1.88
ATPAF1-201ENST00000329231 UNC5DQ6UXZ4 953 aa26.77■■□□□ 1.88
ATPAF1-201ENST00000329231 UNC5AQ6ZN44 842 aa26.77■■□□□ 1.88
ATPAF1-201ENST00000329231 CILP2Q8IUL8 1156 aa26.77■■□□□ 1.88
ATPAF1-201ENST00000329231 OR8K5Q8NH50 307 aa26.77■■□□□ 1.88
ATPAF1-201ENST00000329231 STAMBPL1Q96FJ0 436 aa26.77■■□□□ 1.88
ATPAF1-201ENST00000329231 BIRC8Q96P09 236 aa26.77■■□□□ 1.88
ATPAF1-201ENST00000329231 TRIM56Q9BRZ2 755 aaKnown RBP26.77■■□□□ 1.88
ATPAF1-201ENST00000329231 PITPNM3Q9BZ71 974 aa26.77■■□□□ 1.88
ATPAF1-201ENST00000329231 LOC101059948A0A1B0GTJ6 334 aa26.76■■□□□ 1.87
ATPAF1-201ENST00000329231 USP1O94782 785 aa26.76■■□□□ 1.87
ATPAF1-201ENST00000329231 ESR1P03372 595 aa26.76■■□□□ 1.87
ATPAF1-201ENST00000329231 MT-ND3P03897 115 aa26.76■■□□□ 1.87
ATPAF1-201ENST00000329231 ITGB2P05107 769 aa26.76■■□□□ 1.87
ATPAF1-201ENST00000329231 STAT5AP42229 794 aa26.76■■□□□ 1.87
ATPAF1-201ENST00000329231 ABRQ12979 859 aa26.76■■□□□ 1.87
ATPAF1-201ENST00000329231 THOC5Q13769 683 aaKnown RBP26.76■■□□□ 1.87
ATPAF1-201ENST00000329231 CTSL3PQ5NE16 218 aa26.76■■□□□ 1.87
ATPAF1-201ENST00000329231 PCSK4Q6UW60 755 aa26.76■■□□□ 1.87
ATPAF1-201ENST00000329231 HOOK3Q86VS8 718 aa26.76■■□□□ 1.87
ATPAF1-201ENST00000329231 GALNT6Q8NCL4 622 aa26.76■■□□□ 1.87
ATPAF1-201ENST00000329231 SIGLEC10Q96LC7 697 aa26.76■■□□□ 1.87
ATPAF1-201ENST00000329231 FANCEQ9HB96 536 aa26.76■■□□□ 1.87
ATPAF1-201ENST00000329231 DNALI1O14645 258 aaPredicted RBP26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 PAFAH1B1P43034 410 aa26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 PTGIRP43119 386 aa26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 ETF1P62495 437 aaKnown RBP26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 PLEKHS1Q5SXH7 462 aa26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 PWWP2BQ6NUJ5 590 aa26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 SPESP1Q6UW49 350 aa26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 SYDE1Q6ZW31 735 aaPredicted RBP26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 DCUN1D3Q8IWE4 304 aa26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 UNC5BQ8IZJ1 945 aa26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 CFAP61Q8NHU2 1237 aa26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 RNF31Q96EP0 1072 aa26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 SLC45A3Q96JT2 553 aa26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 SLC12A9Q9BXP2 914 aa26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 SYTL2Q9HCH5 934 aa26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 INTS10Q9NVR2 710 aaKnown RBP26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 RNF14Q9UBS8 474 aa26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 CRYL1Q9Y2S2 319 aa26.75■■□□□ 1.87
ATPAF1-201ENST00000329231 ZCWPW2A0A1B0GU75 182 aa26.74■■□□□ 1.87
ATPAF1-201ENST00000329231 ZNF891A8MT65 544 aaPredicted RBP26.74■■□□□ 1.87
ATPAF1-201ENST00000329231 CHRM5P08912 532 aaPredicted RBP26.74■■□□□ 1.87
ATPAF1-201ENST00000329231 CCNYL3P0C7X3 344 aa26.74■■□□□ 1.87
ATPAF1-201ENST00000329231 TPBGLP0DKB5 382 aa26.74■■□□□ 1.87
ATPAF1-201ENST00000329231 ST6GAL1P15907 406 aa26.74■■□□□ 1.87
ATPAF1-201ENST00000329231 GPR19Q15760 415 aa26.74■■□□□ 1.87
ATPAF1-201ENST00000329231 ZNF470Q6ECI4 717 aa26.74■■□□□ 1.87
ATPAF1-201ENST00000329231 CENPUQ71F23 418 aa26.74■■□□□ 1.87
ATPAF1-201ENST00000329231 KLHL7Q8IXQ5 586 aa26.74■■□□□ 1.87
ATPAF1-201ENST00000329231 ZNF501Q96CX3 271 aaPredicted RBP26.74■■□□□ 1.87
ATPAF1-201ENST00000329231 IL1RAPL1Q9NZN1 696 aa26.74■■□□□ 1.87
ATPAF1-201ENST00000329231 PLAGL1Q9UM63 463 aa26.74■■□□□ 1.87
ATPAF1-201ENST00000329231 TIAF1O95411 115 aa26.73■■□□□ 1.87
ATPAF1-201ENST00000329231 CASQ1P31415 396 aa26.73■■□□□ 1.87
ATPAF1-201ENST00000329231 KYNUQ16719 465 aa26.73■■□□□ 1.87
ATPAF1-201ENST00000329231 LONRF1Q17RB8 773 aa26.73■■□□□ 1.87
ATPAF1-201ENST00000329231 TTC23LQ6PF05 361 aa26.73■■□□□ 1.87
ATPAF1-201ENST00000329231 LMNTD2Q8IXW0 634 aa26.73■■□□□ 1.87
ATPAF1-201ENST00000329231 AGGF1Q8N302 714 aaeCLIP26.73■■□□□ 1.87
ATPAF1-201ENST00000329231 CALML6Q8TD86 181 aa26.73■■□□□ 1.87
ATPAF1-201ENST00000329231 SKA2Q8WVK7 121 aaPredicted RBP26.73■■□□□ 1.87
ATPAF1-201ENST00000329231 TRAPPC9Q96Q05 1148 aa26.73■■□□□ 1.87
ATPAF1-201ENST00000329231 LATS2Q9NRM7 1088 aa26.73■■□□□ 1.87
ATPAF1-201ENST00000329231 PADI1Q9ULC6 663 aa26.73■■□□□ 1.87
ATPAF1-201ENST00000329231 MRFAP1Q9Y605 127 aa26.73■■□□□ 1.87
ATPAF1-201ENST00000329231 CCDC188H7C350 402 aa26.72■■□□□ 1.87
ATPAF1-201ENST00000329231 MSL3P1P0C860 447 aa26.72■■□□□ 1.87
ATPAF1-201ENST00000329231 PKMP14618 531 aaKnown RBP26.72■■□□□ 1.87
ATPAF1-201ENST00000329231 UGT2B7P16662 529 aa26.72■■□□□ 1.87
ATPAF1-201ENST00000329231 CHRM3P20309 590 aa26.72■■□□□ 1.87
ATPAF1-201ENST00000329231 RAB28P51157 221 aa26.72■■□□□ 1.87
ATPAF1-201ENST00000329231 CYP4F2P78329 520 aa26.72■■□□□ 1.87
ATPAF1-201ENST00000329231 DR1Q01658 176 aa26.72■■□□□ 1.87
ATPAF1-201ENST00000329231 IZUMO3Q5VZ72 239 aa26.72■■□□□ 1.87
ATPAF1-201ENST00000329231 TMEM126BQ8IUX1 230 aa26.72■■□□□ 1.87
ATPAF1-201ENST00000329231 FOPNLQ96NB1 174 aa26.72■■□□□ 1.87
ATPAF1-201ENST00000329231 OR2A14Q96R47 310 aa26.72■■□□□ 1.87
ATPAF1-201ENST00000329231 C20orf96Q9NUD7 363 aaPredicted RBP26.72■■□□□ 1.87
ATPAF1-201ENST00000329231 E5RI56 91 aa26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 NIPSNAP2O75323 286 aa26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 SCRG1O75711 98 aa26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 S1PR4O95977 384 aa26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 PVRP15151 417 aa26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 PGAM1P18669 254 aa26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 PKLRP30613 574 aa26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 KIR2DS3Q14952 304 aa26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 TWSG1Q9GZX9 223 aa26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 KLHL25Q9H0H3 589 aa26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 SPHK1Q9NYA1 384 aa26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 IL17BQ9UHF5 180 aa26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 CROTQ9UKG9 612 aa26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 FAM169AQ9Y6X4 670 aa26.71■■□□□ 1.87
ATPAF1-201ENST00000329231 ISM1B1AKI9 464 aa26.7■■□□□ 1.86
ATPAF1-201ENST00000329231 CPNE3O75131 537 aaKnown RBP26.7■■□□□ 1.86
ATPAF1-201ENST00000329231 NTRK1P04629 796 aa26.7■■□□□ 1.86
ATPAF1-201ENST00000329231 IVDP26440 423 aa26.7■■□□□ 1.86
ATPAF1-201ENST00000329231 ATP5DP30049 168 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms