RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 CLEC14AQ86T13 490 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 IFNEQ86WN2 208 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 SPATA2LQ8IUW3 424 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-201ENST00000328923 ZNF555Q8NEP9 628 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 BLOC1S5Q8TDH9 187 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 FUBP1Q96AE4 644 aaKnown RBP11.63□□□□□ -0.55
SHMT2-201ENST00000328923 ITCHQ96J02 903 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 FRMD6Q96NE9 622 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 ZNF670Q9BS34 389 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 DHX35Q9H5Z1 703 aaKnown RBP11.63□□□□□ -0.55
SHMT2-201ENST00000328923 TJP2Q9UDY2 1190 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 MUTYHQ9UIF7 546 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 PEX16Q9Y5Y5 336 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 CENPFP49454 3210 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 C19orf81C9J6K1 198 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 UPK1AO00322 258 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 E2F3O00716 465 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 ITGBL1O95965 494 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-201ENST00000328923 PLATP00750 562 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 CST3P01034 146 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-201ENST00000328923 ZP3P21754 424 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 ASPAP45381 313 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 CLCN7P51798 805 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 CLCNKAP51800 687 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 EPHA5P54756 1037 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 CDH17Q12864 832 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 PRKAA1Q13131 559 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 KCNAB2Q13303 367 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 GRK1Q15835 563 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 DUSP6Q16828 381 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 ZBTB41Q5SVQ8 909 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 HTR3DQ70Z44 454 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 TIGD4Q8IY51 512 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 ABI1Q8IZP0 508 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 UBE2J2Q8N2K1 259 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 ANKRD52Q8NB46 1076 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 REPS2Q8NFH8 660 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 NLGN4YQ8NFZ3 816 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-201ENST00000328923 OR52N1Q8NH53 320 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 LRRN4Q8WUT4 740 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 GPRASP2Q96D09 838 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 AURKBQ96GD4 344 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-201ENST00000328923 Q96MT0 163 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 TTLL2Q9BWV7 592 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 RDH8Q9NYR8 311 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 KIF17Q9P2E2 1029 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 SRRDQ9UH36 339 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 SEPT9Q9UHD8 586 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-201ENST00000328923 INVSQ9Y283 1065 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 A3GALT2U3KPV4 340 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 A0A1W2PQ09 198 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 WDR27A2RRH5 827 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 CLDN24A6NM45 220 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 LDOC1O95751 146 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-201ENST00000328923 HMGCRP04035 888 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 SUPT20HL2P0C7V6 817 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 GADD45AP24522 165 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 LIPAP38571 399 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 ETV6P41212 452 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 NAGLUP54802 743 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 CRADDP78560 199 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 FRG1Q14331 258 aaKnown RBP11.62□□□□□ -0.55
SHMT2-201ENST00000328923 SURF1Q15526 300 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 FUT11Q495W5 492 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 SPATS1Q496A3 300 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 COL13A1Q5TAT6 717 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-201ENST00000328923 FAM219BQ5XKK7 198 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 XRRA1Q6P2D8 792 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 ZNF782Q6ZMW2 699 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-201ENST00000328923 HS3ST5Q8IZT8 346 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 OR7G3Q8NG95 312 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 C18orf25Q96B23 403 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-201ENST00000328923 RNF145Q96MT1 663 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 GPR137Q96N19 417 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 QKIQ96PU8 341 aaKnown RBP eCLIP11.62□□□□□ -0.55
SHMT2-201ENST00000328923 SLC9A7Q96T83 725 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 ADPGKQ9BRR6 497 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 TBCDQ9BTW9 1192 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 IL22Q9GZX6 179 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 RNF121Q9H920 327 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 SLAMF7Q9NQ25 335 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 OXSMQ9NWU1 459 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 CMTM6Q9NX76 183 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 ACSL5Q9ULC5 683 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 ADAMTS5Q9UNA0 930 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 SLC22A7Q9Y694 548 aa11.62□□□□□ -0.55
SHMT2-201ENST00000328923 TRBV23-1A0A0A0MS06 115 aa11.61□□□□□ -0.55
SHMT2-201ENST00000328923 FAM92AA1XBS5 289 aa11.61□□□□□ -0.55
SHMT2-201ENST00000328923 C2CD4BA6NLJ0 364 aa11.61□□□□□ -0.55
SHMT2-201ENST00000328923 KHNYNO15037 678 aaKnown RBP11.61□□□□□ -0.55
SHMT2-201ENST00000328923 SNAPINO95295 136 aa11.61□□□□□ -0.55
SHMT2-201ENST00000328923 ZNF91Q05481 1191 aa11.61□□□□□ -0.55
SHMT2-201ENST00000328923 CDK5R2Q13319 367 aa11.61□□□□□ -0.55
SHMT2-201ENST00000328923 TRMT1LQ7Z2T5 733 aaKnown RBP11.61□□□□□ -0.55
SHMT2-201ENST00000328923 GALNT10Q86SR1 603 aa11.61□□□□□ -0.55
SHMT2-201ENST00000328923 SYVN1Q86TM6 617 aa11.61□□□□□ -0.55
SHMT2-201ENST00000328923 RDH10Q8IZV5 341 aa11.61□□□□□ -0.55
SHMT2-201ENST00000328923 VWA5B2Q8N398 1253 aa11.61□□□□□ -0.55
SHMT2-201ENST00000328923 PCDH19Q8TAB3 1148 aa11.61□□□□□ -0.55
SHMT2-201ENST00000328923 HEXDCQ8WVB3 486 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms