RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 NCF4Q15080 339 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 DNAJC21Q5F1R6 531 aaKnown RBP17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 PRAMEF17Q5VTA0 474 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 UNC5AQ6ZN44 842 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 CDHR3Q6ZTQ4 885 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 FAM26EQ8N5C1 309 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 OR52K1Q8NGK4 314 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 ANKMY1Q9P2S6 941 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 PACSIN2Q9UNF0 486 aaPredicted RBP17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 ICKQ9UPZ9 632 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 PLAAQ9Y263 795 aa17.12■□□□□ 0.33
PTPMT1-201ENST00000326656 TCRBV7S2A1N4TA0A589 114 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 C9J4A7 227 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 BHMG1C9JSJ3 638 aaPredicted RBP17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 ZNF749O43361 778 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 PDGFAP04085 211 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 PTGIRP43119 386 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 LMAN1P49257 510 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 KIR2DS3Q14952 304 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 OASLQ15646 514 aaKnown RBP17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 SYTL3Q4VX76 610 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 ZNF385CQ66K41 422 aaPredicted RBP17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 LCN10Q6JVE6 187 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 AFTPHQ6ULP2 937 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 FAM198BQ6UWH4 519 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 C19orf47Q8N9M1 422 aaKnown RBP17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 GLIS1Q8NBF1 620 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 OR5AR1Q8NGP9 310 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 OR13J1Q8NGT2 312 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 OR4L1Q8NH43 312 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 N4BP2L2Q92802 583 aaPredicted RBP17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 HDAC10Q969S8 669 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 OR2A14Q96R47 310 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 TSSK1BQ9BXA7 367 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 XKR8Q9H6D3 395 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 ETNK1Q9HBU6 452 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 PRSS21Q9Y6M0 314 aa17.11■□□□□ 0.33
PTPMT1-201ENST00000326656 CCDC78A2IDD5 438 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 TTLL8A6PVC2 850 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 E7EVH7 732 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 LIASO43766 372 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 OR2B3O76000 313 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 IGHEP01854 428 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 CHRM5P08912 532 aaPredicted RBP17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 PVRP15151 417 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 UGT2B7P16662 529 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 VARSP26640 1264 aaKnown RBP17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 MLLT10P55197 1068 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 SLC5A12Q1EHB4 618 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 TSTD2Q5T7W7 516 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 CPZQ66K79 652 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 RHBDD2Q6NTF9 364 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 TLDC1Q6P9B6 456 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 RAB43Q86YS6 212 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 EFCAB3Q8N7B9 438 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 GALNT11Q8NCW6 608 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 PROKR1Q8TCW9 393 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 ASZ1Q8WWH4 475 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 CARD6Q9BX69 1037 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 PIH1D1Q9NWS0 290 aaKnown RBP17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 SRPK3Q9UPE1 567 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 ZNF148Q9UQR1 794 aa17.1■□□□□ 0.33
PTPMT1-201ENST00000326656 A0A0J9YY10 115 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 H3BMH7 237 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 KLHL41O60662 606 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 DPM1O60762 260 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 RPN2P04844 631 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 TPBGLP0DKB5 382 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 GABRA4P48169 554 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 SSPNQ14714 243 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 PTCHD3Q3KNS1 767 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 CCDC38Q502W7 563 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 AARS2Q5JTZ9 985 aaKnown RBP17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 SEL1L2Q5TEA6 688 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 PPP1R21Q6ZMI0 780 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 SLC22A15Q8IZD6 547 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 ZBTB2Q8N680 514 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 FLVCR1-AS1Q8TAF5 88 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 SLC22A18Q96BI1 424 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 AP1M1Q9BXS5 423 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 TSGA10Q9BZW7 698 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 KLHL25Q9H0H3 589 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 FAM60AQ9NP50 221 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 CASS4Q9NQ75 786 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 C5AR2Q9P296 337 aa17.09■□□□□ 0.33
PTPMT1-201ENST00000326656 RELNP78509 3460 aa17.08■□□□□ 0.33
PTPMT1-201ENST00000326656 TNRC6AQ8NDV7 1962 aaKnown RBP17.08■□□□□ 0.33
PTPMT1-201ENST00000326656 OR51F1A6NGY5 319 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 AP3B1O00203 1094 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 VPS4BO75351 444 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 KLF7O75840 302 aaPredicted RBP17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 GOT2P00505 430 aaKnown RBP17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 CDC25BP30305 580 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 RAB28P51157 221 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 CHAF1BQ13112 559 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 FASTKD1Q53R41 847 aaKnown RBP17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 C4orf22Q6V702 233 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 SLC13A5Q86YT5 568 aaPredicted RBP17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 LURAP1LQ8IV03 231 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 DNAJC22Q8N4W6 341 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms