RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SMIM30A4D0T7 59 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 BMP10O95393 424 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 GNPDA1P46926 289 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 HCAR3P49019 387 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 CD83Q01151 205 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 EPS8Q12929 822 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 OR4D1Q15615 310 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 TECRLQ5HYJ1 363 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 STEAP4Q687X5 459 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 GPR153Q6NV75 609 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 TRIM48Q8IWZ4 208 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 PDPRQ8NCN5 879 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 FUNDC2Q9BWH2 189 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 DCSTAMPQ9H295 470 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 IGFLR1Q9H665 355 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 CTPS2Q9NRF8 586 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 PDP1Q9P0J1 537 aaPredicted RBP14.97□□□□□ -0.01
VARS2-201ENST00000321897 TBC1D30Q9Y2I9 924 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 C2orf78A6NCI8 922 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 FAM25AB3EWG3 89 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 FAM25CB3EWG5 89 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 FAM25GB3EWG6 89 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 ANKRD66B4E2M5 251 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 ARRB2P32121 409 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 STK19P49842 368 aaPredicted RBP14.97□□□□□ -0.01
VARS2-201ENST00000321897 SNRPD1P62314 119 aaKnown RBP14.97□□□□□ -0.01
VARS2-201ENST00000321897 TRAP1Q12931 704 aaKnown RBP14.97□□□□□ -0.01
VARS2-201ENST00000321897 ANKRD26P1Q6NSI1 321 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 ZNF773Q6PK81 442 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 MAMDC4Q6UXC1 1216 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 DNAJB7Q7Z6W7 309 aaPredicted RBP14.97□□□□□ -0.01
VARS2-201ENST00000321897 PTERQ96BW5 349 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 BRD9Q9H8M2 597 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 SPG21Q9NZD8 308 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 MALT1Q9UDY8 824 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 SPEF1Q9Y4P9 236 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 DNAJC15Q9Y5T4 150 aa14.97□□□□□ -0.01
VARS2-201ENST00000321897 SCN1AP35498 2009 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 CCDC182A6NF36 153 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 AQP12BA6NM10 295 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 CPNE3O75131 537 aaKnown RBP14.96□□□□□ -0.01
VARS2-201ENST00000321897 ZNF24P17028 368 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 OR2B6P58173 313 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 RAB14P61106 215 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 NCS1P62166 190 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 FKBP1BP68106 108 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 FAM189BP81408 668 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 IL18R1Q13478 541 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 ZNF678Q5SXM1 525 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 DDI2Q5TDH0 399 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 SERINC5Q86VE9 423 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 AQP12AQ8IXF9 295 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 PTCD2Q8WV60 388 aaKnown RBP14.96□□□□□ -0.01
VARS2-201ENST00000321897 NACC2Q96BF6 587 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 C3orf30Q96M34 536 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 LHPPQ9H008 270 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.96□□□□□ -0.01
VARS2-201ENST00000321897 TRBV23OR9-2A0A075B6M9 112 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 ALDH1A2O94788 518 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 EPN2O95208 641 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 OXTRP30559 389 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 HPCAL1P37235 193 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 HERC3Q15034 1050 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 TAZQ16635 292 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 DEFB115Q30KQ5 88 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 TMPRSS11BQ86T26 416 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 COL26A1Q96A83 441 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 BIRC7Q96CA5 298 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 LRCH3Q96II8 777 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 ITCHQ96J02 903 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 PPP3R2Q96LZ3 170 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 AARSD1Q9BTE6 412 aaKnown RBP14.96□□□□□ -0.01
VARS2-201ENST00000321897 MAGEH1Q9H213 219 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 MFSD1Q9H3U5 465 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 KAT8Q9H7Z6 458 aaKnown RBP14.96□□□□□ -0.01
VARS2-201ENST00000321897 OSER1Q9NX31 292 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 MAGEL2Q9UJ55 1249 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 SPO11Q9Y5K1 396 aa14.96□□□□□ -0.01
VARS2-201ENST00000321897 A0A1W2PQ72 361 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 LDB2O43679 373 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 PSIP1O75475 530 aaKnown RBP14.96□□□□□ -0.02
VARS2-201ENST00000321897 INMTO95050 263 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 SNX4O95219 450 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 ITGBL1O95965 494 aaPredicted RBP14.96□□□□□ -0.02
VARS2-201ENST00000321897 S1PR4O95977 384 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 OPN1SWP03999 348 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 CDH1P12830 882 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 CD247P20963 164 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 CHRNA6Q15825 494 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 KCNJ8Q15842 424 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 UNC50Q53HI1 259 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 PPP4R4Q6NUP7 873 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 ARHGAP12Q8IWW6 846 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 OR4F6Q8NGB9 312 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 TMEM174Q8WUU8 243 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.96□□□□□ -0.023e-13■■□□□ 12.4
VARS2-201ENST00000321897 C14orf119Q9NWQ9 140 aa14.96□□□□□ -0.02
VARS2-201ENST00000321897 CACNA1CQ13936 2221 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 BBIP1A8MTZ0 92 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 I6L893 689 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms