RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 CTSOP43234 321 aaPredicted RBP15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 LSM3P62310 102 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 CTF1Q16619 201 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 PAGE2BQ5JRK9 111 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 ANKRD34AQ69YU3 496 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 PRR23BQ6ZRT6 265 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 SLCO6A1Q86UG4 719 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 SERPINA9Q86WD7 417 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 ST13P5Q8NFI4 369 aaPredicted RBP15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 OR2T11Q8NH01 316 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 PNPT1Q8TCS8 783 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 HMG20AQ9NP66 347 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 LATS2Q9NRM7 1088 aa15.25■□□□□ 0.03
SHROOM1-201ENST00000319854 DNAH14Q0VDD8 3507 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 ALBP02768 609 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 BMP4P12644 408 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 HSPA7P48741 367 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 EPHB3P54753 998 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 OCA2Q04671 838 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 TUBA3CQ13748 450 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 NCEH1Q6PIU2 408 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 RFLNAQ6ZTI6 216 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 MFSD4AQ8N468 514 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 RHEBL1Q8TAI7 183 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 METTL6Q8TCB7 284 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 MTFMTQ96DP5 389 aaKnown RBP15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 MYO19Q96H55 970 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 NTN4Q9HB63 628 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 ARIH1Q9Y4X5 557 aaPredicted RBP15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 PCDHGA11Q9Y5H2 935 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 PRSS21Q9Y6M0 314 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 PMF1-BGLAPU3KQ54 211 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 TEX28O15482 410 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 FKTNO75072 461 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 SOD2P04179 222 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 C7P10643 843 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 FSHRP23945 695 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 CAMK2BQ13554 666 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 NFYCQ13952 458 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 CBX2Q14781 532 aaPredicted RBP15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 INAQ16352 499 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 MEP1AQ16819 746 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 KANK2Q63ZY3 851 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 ALG1LQ6GMV1 187 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 IL27RAQ6UWB1 636 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 DET1Q7L5Y6 550 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 OTOP2Q7RTS6 562 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 GALNT7Q86SF2 657 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 CMTM8Q8IZV2 173 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 TTC30BQ8N4P2 665 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 LRRC58Q96CX6 371 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 ZNF558Q96NG5 402 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 CLPBQ9H078 707 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 INSL5Q9Y5Q6 135 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 SYCE1LA8MT33 242 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 WEE1P30291 646 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 CD70P32970 193 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 GSK3BP49841 420 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 SUOXP51687 545 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 NFKB2Q00653 900 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 POM121L1PQ3SYA9 428 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 LETMD1Q6P1Q0 360 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 NKAPQ8N5F7 415 aaKnown RBP15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 TRIM15Q9C019 465 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 PCTPQ9UKL6 214 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 PCDHA9Q9Y5H5 950 aa15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 OAS3Q9Y6K5 1087 aaKnown RBP15.24■□□□□ 0.03
SHROOM1-201ENST00000319854 FNDC1Q4ZHG4 1894 aaPredicted RBP15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 UGT2B11O75310 529 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 SLC25A14O95258 325 aaPredicted RBP15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 CAPN1P07384 714 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 AGXTP21549 392 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 GSTM2P28161 218 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 VEGFBP49765 207 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 SLC13A2Q13183 592 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 C5orf22Q49AR2 442 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 PLEKHG7Q6ZR37 379 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 GPRIN3Q6ZVF9 776 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 MINDY1Q8N5J2 469 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 ADAMTS19Q8TE59 1207 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 CAPSLQ8WWF8 208 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 HOPXQ9BPY8 73 aaPredicted RBP15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 ZFYVE1Q9HBF4 777 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 TMEM39AQ9NV64 488 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 IL17CQ9P0M4 197 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 CD84Q9UIB8 345 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 ZNF639Q9UID6 485 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 PCDHGA8Q9Y5G5 932 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 MYO9BQ13459 2157 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 ABLIM3O94929 683 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 CHEK2O96017 543 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 LDLRP01130 860 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 CYBBP04839 570 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 BMPR1AP36894 532 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 GP2P55259 537 aaKnown RBP15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 ERVPABLB-1P60509 514 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 BCL2L1Q07817 233 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 PAGE3Q5JUK9 113 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 TMEM236Q5W0B7 351 aa15.23■□□□□ 0.03
SHROOM1-201ENST00000319854 RALGPS2Q86X27 583 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms