RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 FAM208BQ5VWN6 2430 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 COL1A2P08123 1366 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 COL2A1P02458 1487 aaPredicted RBP4.44□□□□□ -1.7
CNOT1-201ENST00000317147 PRAMEF33A0A0G2JMD5 474 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 SOBPA7XYQ1 873 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 CASKO14936 926 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 PLOD3O60568 738 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 PRAMEF10O60809 474 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 RNASEH2AO75792 299 aaKnown RBP4.44□□□□□ -1.7
CNOT1-201ENST00000317147 ALDH1A2O94788 518 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 IFNW1P05000 195 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 MMP12P39900 470 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 PSMD8P48556 350 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 RARRES1P49788 294 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 NPY5RQ15761 445 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 DPYSL2Q16555 572 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 ARL13AQ5H913 290 aaPredicted RBP4.44□□□□□ -1.7
CNOT1-201ENST00000317147 COLEC12Q5KU26 742 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 CDKL4Q5MAI5 379 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 ATG9BQ674R7 924 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 LRRC66Q68CR7 880 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 ZBTB46Q86UZ6 589 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 TREML1Q86YW5 311 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 FIBCD1Q8N539 461 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 ABHD11Q8NFV4 315 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 OR13F1Q8NGS4 319 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 ZNF671Q8TAW3 534 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 LPGAT1Q92604 370 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 S100PBPQ96BU1 408 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 LRRC58Q96CX6 371 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 MSANTD3Q96H12 275 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 CPB2Q96IY4 423 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 PCDHB18PQ96TA0 734 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 PORCNQ9H237 461 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 OR51E2Q9H255 320 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 IKZF4Q9H2S9 585 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 ADAM7Q9H2U9 754 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 WDCPQ9H6R7 721 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 MYNNQ9NPC7 610 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 TMEM5Q9Y2B1 443 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 NYNRINQ9P2P1 1898 aaKnown RBP4.44□□□□□ -1.7
CNOT1-201ENST00000317147 LOC100130705A0A1B0GUX0 176 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 TSTD3H0UI37 97 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 KERAO60938 352 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 GABBR2O75899 941 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 AGR2O95994 175 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 ALDH3B2P48448 385 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 RBBP4Q09028 425 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 ABHD18Q0P651 414 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 ZSWIM7Q19AV6 140 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 MILR1Q7Z6M3 343 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 PDZD9Q8IXQ8 264 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 RHOXF1Q8NHV9 184 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 SLC7A13Q8TCU3 470 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 SETD7Q8WTS6 366 aaKnown RBP4.44□□□□□ -1.7
CNOT1-201ENST00000317147 RPL3LQ92901 407 aaKnown RBP4.44□□□□□ -1.7
CNOT1-201ENST00000317147 RIT1Q92963 219 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 NTAN1Q96AB6 310 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 KIF12Q96FN5 646 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 REXO5Q96IC2 774 aaKnown RBP4.44□□□□□ -1.7
CNOT1-201ENST00000317147 CCDC115Q96NT0 180 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 TMEM209Q96SK2 561 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 GPR22Q99680 433 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 SEPT5Q99719 369 aaPredicted RBP4.44□□□□□ -1.7
CNOT1-201ENST00000317147 AIF1LQ9BQI0 150 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 GPR63Q9BZJ6 419 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 RSPH9Q9H1X1 276 aaPredicted RBP4.44□□□□□ -1.7
CNOT1-201ENST00000317147 CNOT2Q9NZN8 540 aaKnown RBP4.44□□□□□ -1.7
CNOT1-201ENST00000317147 XPR1Q9UBH6 696 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 GTF2IRD1Q9UHL9 959 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 PRORSD1PA6NEY8 169 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 AGAP5A6NIR3 686 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 EI24O14681 340 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 RDH16O75452 317 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 SLITRK3O94933 977 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 NDUFB10O96000 172 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 IL1R1P14778 569 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 CPN2P22792 545 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 MGAT1P26572 445 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 OSTNP61366 133 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 CSHL1Q14406 222 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 SLC25A52Q3SY17 297 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 OVOS1Q6IE37 1185 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 TCEAL6Q6IPX3 200 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 FSTL4Q6MZW2 842 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 HAGHLQ6PII5 290 aaPredicted RBP4.44□□□□□ -1.7
CNOT1-201ENST00000317147 LCLAT1Q6UWP7 414 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 TXNRD3Q86VQ6 643 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 IFNL1Q8IU54 200 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 SLC13A3Q8WWT9 602 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 GATAD2BQ8WXI9 593 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 SLC41A3Q96GZ6 507 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 POLR1EQ9GZS1 481 aaKnown RBP4.44□□□□□ -1.7
CNOT1-201ENST00000317147 ZNF304Q9HCX3 659 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 TRIM36Q9NQ86 728 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 ADGRE2Q9UHX3 823 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 SYNJ2BP-COX16A0A087WUM0 186 aa4.43□□□□□ -1.7
CNOT1-201ENST00000317147 SULT1C2O00338 296 aa4.43□□□□□ -1.7
CNOT1-201ENST00000317147 SNAPINO95295 136 aa4.43□□□□□ -1.7
CNOT1-201ENST00000317147 ZSCAN5DPP0CG00 497 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms