RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 ARSAP15289 507 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 ARNTP27540 789 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 RPL3P39023 403 aaKnown RBP13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 MAGEA12P43365 314 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 ELP6Q0PNE2 266 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 C18orf21Q32NC0 220 aaPredicted RBP13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 OGFRL1Q5TC84 451 aaPredicted RBP13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 KANK2Q63ZY3 851 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 MBOAT1Q6ZNC8 495 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 DPY19L3Q6ZPD9 716 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 Q6ZVL8 140 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 CHSY3Q70JA7 882 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 BIRC7Q96CA5 298 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 RERGLQ9H628 205 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 FAM220BPB1ANY3 271 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 ATP6V1G1O75348 118 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 SEC24AO95486 1093 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 EBLN1P0CF75 366 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 CDH1P12830 882 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 CAPN3P20807 821 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 SLC6A2P23975 617 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 IGFBP5P24593 272 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 CXCR2P25025 360 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 HOXD9P28356 352 aaPredicted RBP13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 RFX3P48380 749 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 ATP1A4Q13733 1029 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 TEAD2Q15562 447 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 LY6G5CQ5SRR4 150 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 FRG2Q64ET8 278 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 BRAT1Q6PJG6 821 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 NANOGNBQ7Z5D8 188 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 HIPK1Q86Z02 1210 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 TMEM126BQ8IUX1 230 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 SCAMP4Q969E2 229 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 C3orf30Q96M34 536 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 QRFPRQ96P65 431 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 FRG2BQ96QU4 278 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 CEP44Q9C0F1 390 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 RNF38Q9H0F5 515 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 PLAC1Q9HBJ0 212 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 PCDHGA11Q9Y5H2 935 aa13.13□□□□□ -0.31
PCDHB9-201ENST00000316105 MAGEB17A8MXT2 336 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 hCG_2039718K7EN88 272 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 CSF2RAP15509 400 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 ZNF140P52738 457 aaPredicted RBP13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 SEMA3AQ14563 771 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 CMPK2Q5EBM0 449 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 MANEALQ5VSG8 457 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 MED27Q6P2C8 311 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 TRIM40Q6P9F5 258 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 BLOC1S3Q6QNY0 202 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 TMEM173Q86WV6 379 aaPredicted RBP13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 PARP8Q8N3A8 854 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 POP5Q969H6 163 aaKnown RBP13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 PLEKHG4BQ96PX9 1271 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 INTS7Q9NVH2 962 aaKnown RBP13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 RIMKLBQ9ULI2 386 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 SATB2Q9UPW6 733 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 RUVBL1Q9Y265 456 aaKnown RBP13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 MROH6A6NGR9 719 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 ZBTB11O95625 1053 aaPredicted RBP13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 IGLV3-25P01717 112 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 APOA1P02647 267 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 EPHX1P07099 455 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 HTR6P50406 440 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 ERICH5Q6P6B1 374 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 MTSS1LQ765P7 747 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 LRRC70Q7Z2Q7 622 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 ZNF605Q86T29 641 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 CD200R1Q8TD46 325 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 ZUFSPQ96AP4 578 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 UBXN10Q96LJ8 280 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 OR2AG1Q9H205 316 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 PDP1Q9P0J1 537 aaPredicted RBP13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 IL17CQ9P0M4 197 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 SLCO3A1Q9UIG8 710 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 H0Y858 1186 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 HTRA2O43464 458 aaPredicted RBP13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 ERN1O75460 977 aaKnown RBP13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 PRKD3O94806 890 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 CLIC3O95833 236 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 ACRV1P26436 265 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 PRDX3P30048 256 aaKnown RBP13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 PSMD8P48556 350 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 HNMTP50135 292 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 AP1S2P56377 157 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 C21orf59P57076 290 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 SPIBQ01892 262 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 RUNX1T1Q06455 604 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 C2orf80Q0P641 193 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 TSPAN33Q86UF1 283 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 C17orf64Q86WR6 236 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 ZDHHC21Q8IVQ6 265 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 TSPEARQ8WU66 669 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 DPF3Q92784 378 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 CXorf21Q9HAI6 301 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 IKZF3Q9UKT9 509 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 CCNA2P20248 432 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 SFSWAPQ12872 951 aaKnown RBP13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 LDLRAP1Q5SW96 308 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms