RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CD86P42081 329 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 DYNC1I2Q13409 638 aaKnown RBP7.65□□□□□ -1.18
CNOT4-201ENST00000315544 PDCD2Q16342 344 aaPredicted RBP7.65□□□□□ -1.18
CNOT4-201ENST00000315544 MSANTD1Q6ZTZ1 278 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 DCP2Q8IU60 420 aaKnown RBP7.65□□□□□ -1.18
CNOT4-201ENST00000315544 CCDC103Q8IW40 242 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 CTAGE3PQ8IX95 158 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 FRS2Q8WU20 508 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 CDKL2Q92772 493 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 MRGPRX3Q96LB0 322 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 UGT2B28Q9BY64 529 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 ALG2Q9H553 416 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 PRDM8Q9NQV8 689 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 FARSBQ9NSD9 589 aaKnown RBP7.65□□□□□ -1.18
CNOT4-201ENST00000315544 REV1Q9UBZ9 1251 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 CLGNO14967 610 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 TNFRSF21O75509 655 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 ZNF682O95780 498 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 LAG3P18627 525 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 ELK4P28324 431 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 SERPINB6P35237 376 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 RAB15P59190 212 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 PFN3P60673 137 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 SARNPP82979 210 aaKnown RBP7.65□□□□□ -1.18
CNOT4-201ENST00000315544 PLAURQ03405 335 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 NME3Q13232 169 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 UGP2Q16851 508 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 SLC25A30Q5SVS4 291 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 SERPINA11Q86U17 422 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 SPPL2CQ8IUH8 684 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 LACC1Q8IV20 430 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 ZZZ3Q8IYH5 903 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 ATP6V0D2Q8N8Y2 350 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 DDI1Q8WTU0 396 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 SH3YL1Q96HL8 342 aaPredicted RBP7.65□□□□□ -1.18
CNOT4-201ENST00000315544 MUS81Q96NY9 551 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 KLHL5Q96PQ7 755 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 PRPF18Q99633 342 aaKnown RBP7.65□□□□□ -1.18
CNOT4-201ENST00000315544 MRPL9Q9BYD2 267 aaKnown RBP7.65□□□□□ -1.18
CNOT4-201ENST00000315544 SOX17Q9H6I2 414 aaPredicted RBP7.65□□□□□ -1.18
CNOT4-201ENST00000315544 CHST2Q9Y4C5 530 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 AIM2O14862 343 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 AZIN1O14977 448 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 GALTP07902 379 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 RBP1P09455 135 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 PORP16435 677 aaPredicted RBP7.65□□□□□ -1.19
CNOT4-201ENST00000315544 CEBPBP17676 345 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 UGT2B10P36537 528 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 DCTP40126 519 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 MXRA7P84157 204 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 PTSQ03393 145 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 PHKG1Q16816 387 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 INO80DQ53TQ3 878 aaPredicted RBP7.65□□□□□ -1.19
CNOT4-201ENST00000315544 NEK5Q6P3R8 708 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 SHQ1Q6PI26 577 aaKnown RBP7.65□□□□□ -1.19
CNOT4-201ENST00000315544 GOLGA7Q7Z5G4 137 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 DCBLD1Q8N8Z6 715 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 IL17RCQ8NAC3 791 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 PHF10Q8WUB8 498 aaKnown RBP7.65□□□□□ -1.19
CNOT4-201ENST00000315544 ZNF764Q96H86 408 aaPredicted RBP7.65□□□□□ -1.19
CNOT4-201ENST00000315544 MTRRQ9UBK8 725 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 AUP1Q9Y679 476 aa7.65□□□□□ -1.19
CNOT4-201ENST00000315544 PRAMEF27A3QJZ7 478 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 ARRDC5A6NEK1 342 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 EI24O14681 340 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 FFAR1O14842 300 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 UBDO15205 165 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 MYCLP1P12525 358 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-201ENST00000315544 LHCGRP22888 699 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 SNX16P57768 344 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 IRX4P78413 519 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 EMX1Q04741 257 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-201ENST00000315544 SEPT6Q14141 434 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 INAVAQ3KP66 663 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 KIAA1841Q6NSI8 718 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 GALNT18Q6P9A2 607 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 SYCE2Q6PIF2 218 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 SLC2A7Q6PXP3 512 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 PTAR1Q7Z6K3 402 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-201ENST00000315544 OR8J2Q8NGG1 315 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 MCUR1Q96AQ8 359 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 HSPBAP1Q96EW2 488 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 IGSF21Q96ID5 467 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 FAM193BQ96PV7 902 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-201ENST00000315544 NELL2Q99435 816 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 CCSER2Q9H7U1 834 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 UXTQ9UBK9 157 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-201ENST00000315544 PCDHGA6Q9Y5G7 932 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 PCDHGA2Q9Y5H1 932 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 PCYT1BQ9Y5K3 369 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-201ENST00000315544 COMMD10Q9Y6G5 202 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 AP1M2Q9Y6Q5 423 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 RGS13O14921 159 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 HUS1O60921 280 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 HLA-DQB1P01920 261 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 OR4Q2P0C623 313 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 THPOP40225 353 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 MAN2A2P49641 1150 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 ERFP50548 548 aa7.64□□□□□ -1.19
CNOT4-201ENST00000315544 ZP2Q05996 745 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms