RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 MMP3P08254 477 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 SMIM10L2AP0DMW4 78 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 SMIM10L2BP0DMW5 78 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 PCSK1P29120 753 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 KRT20P35900 424 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 SCNN1GP51170 649 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 SUOXP51687 545 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 MLLT6P55198 1093 aaPredicted RBP14.39□□□□□ -0.11
COL6A2-202ENST00000310645 ZNF235Q14590 738 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 PLEKHG6Q3KR16 790 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 TIGD5Q53EQ6 642 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 LINC00299Q6ZSB3 139 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 GDPD3Q7L5L3 318 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 GALNT13Q8IUC8 556 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 MSRB3Q8IXL7 192 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 PARP16Q8N5Y8 322 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 SLC10A4Q96EP9 437 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 DHRS1Q96LJ7 313 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 CDK5RAP1Q96SZ6 601 aaKnown RBP14.39□□□□□ -0.11
COL6A2-202ENST00000310645 APOL4Q9BPW4 351 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 NMUR1Q9HB89 426 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 FARSBQ9NSD9 589 aaKnown RBP14.39□□□□□ -0.11
COL6A2-202ENST00000310645 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.39□□□□□ -0.11
COL6A2-202ENST00000310645 UGT2A1Q9Y4X1 527 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 SNX8Q9Y5X2 465 aa14.39□□□□□ -0.11
COL6A2-202ENST00000310645 PER2O15055 1255 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 MUSKO15146 869 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 NTRK1P04629 796 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 HSMCR30P0CW71 290 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 SMPD1P17405 629 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 PAX3P23760 479 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 LIX1Q8N485 282 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 BCL7BQ9BQE9 202 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 HEBP1Q9NRV9 189 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 MIOSQ9NXC5 875 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 QPCTLQ9NXS2 382 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 PDCD11Q14690 1871 aaKnown RBP14.38□□□□□ -0.11
COL6A2-202ENST00000310645 VPS26AO75436 327 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 ACVRL1P37023 503 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 IL2P60568 153 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 ZNF181Q2M3W8 571 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 DALRD3Q5D0E6 543 aaKnown RBP14.38□□□□□ -0.11
COL6A2-202ENST00000310645 CPZQ66K79 652 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 Q6ZPB1 254 aaPredicted RBP14.38□□□□□ -0.11
COL6A2-202ENST00000310645 LACC1Q8IV20 430 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 NLGN4XQ8N0W4 816 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 CLSTN3Q9BQT9 956 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 MMP27Q9H306 513 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 ABCC13Q9NSE7 274 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 ZNF221Q9UK13 617 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 SNX6Q9UNH7 406 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 N6AMT1Q9Y5N5 214 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 A0A1W2PQH9 124 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 PABPN1LA6NDY0 278 aaKnown RBP14.38□□□□□ -0.11
COL6A2-202ENST00000310645 M0QX08 132 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 STX16O14662 325 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 GPR182O15218 404 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 GPR39O43194 453 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 TREHO43280 583 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 SEC22BO75396 215 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 APOA1P02647 267 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 PGRP06401 933 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 HOXB8P17481 243 aaPredicted RBP14.38□□□□□ -0.11
COL6A2-202ENST00000310645 ACVR2AP27037 513 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 GDF5P43026 501 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 LRRTM3Q86VH5 581 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 P3H2Q8IVL5 708 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 CCDC115Q96NT0 180 aa14.38□□□□□ -0.11
COL6A2-202ENST00000310645 ANKRD28O15084 1053 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 B3GAT3O94766 335 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 FKBP9O95302 570 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 HOXC13P31276 330 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 TGFBR2P37173 567 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 CREMQ03060 361 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 IL18R1Q13478 541 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 CAMK2BQ13554 666 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 PTPRRQ15256 657 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 CLPPQ16740 277 aaPredicted RBP14.37□□□□□ -0.11
COL6A2-202ENST00000310645 ZRANB3Q5FWF4 1079 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 MSANTD2Q6P1R3 559 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.37□□□□□ -0.11
COL6A2-202ENST00000310645 FKBP9P1Q75LS8 142 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 MIB1Q86YT6 1006 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 NKAPQ8N5F7 415 aaKnown RBP14.37□□□□□ -0.11
COL6A2-202ENST00000310645 EFHBQ8N7U6 833 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 BRSK1Q8TDC3 778 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 SLC38A4Q969I6 547 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 PYURFQ96I23 114 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 Q96MT0 163 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 CHCHD6Q9BRQ6 235 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 ROGDIQ9GZN7 287 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 NUAK2Q9H093 628 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 IPPKQ9H8X2 491 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 LOC285095A0A1B0GVY8 99 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 METTL15A6NJ78 407 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 SAGE2PA6NJ88 616 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 AP3D1O14617 1153 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 TLR5O60602 858 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 CYP7B1O75881 506 aa14.37□□□□□ -0.11
COL6A2-202ENST00000310645 VIPP01282 170 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms