RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 C2orf74A8MZ97 194 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PLD2O14939 933 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 C1orf105O95561 183 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 C9P02748 559 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 POLR2CP19387 275 aaPredicted RBP10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CD9P21926 228 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MCM3P25205 808 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 GABRB3P28472 473 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ECHS1P30084 290 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ARL4DP49703 201 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CFHR1Q03591 330 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CAMK2BQ13554 666 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 GBX1Q14549 363 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 KYNUQ16719 465 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 KBTBD12Q3ZCT8 623 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CACHD1Q5VU97 1274 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CYB5D1Q6P9G0 228 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ZNF574Q6ZN55 896 aaPredicted RBP10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RELL1Q8IUW5 271 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PPM1NQ8N819 430 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 GATA6Q92908 595 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RAD51AP1Q96B01 352 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TSPAN17Q96FV3 270 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RBBP8Q99708 897 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SLC30A3Q99726 388 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 XKR8Q9H6D3 395 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CCDC86Q9H6F5 360 aaKnown RBP10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SMYD2Q9NRG4 433 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 NINJ2Q9NZG7 142 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 GALPQ9UBC7 116 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PISDQ9UG56 409 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PLAGL1Q9UM63 463 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ICKQ9UPZ9 632 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RUVBL2Q9Y230 463 aaKnown RBP10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 VWA7Q9Y334 891 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PCDHGA8Q9Y5G5 932 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PSAT1Q9Y617 370 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 NFS1Q9Y697 457 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PIPSLA2A3N6 862 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TMEM8BA6NDV4 472 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ZNF839A8K0R7 811 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 EFCAB7A8K855 629 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CXorf49A8MYA2 514 aaPredicted RBP10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 BTN3A1O00481 513 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RASGRF2O14827 1237 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TOX3O15405 576 aaPredicted RBP10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MAP3K7O43318 606 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 BRINP1O60477 761 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PIAS1O75925 651 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ACSL3O95573 720 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ANKRD34CP0C6C1 535 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CYP2A7P20853 494 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CDH3P22223 829 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 FDXRP22570 491 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PKLRP30613 574 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SPRP35270 261 aaPredicted RBP10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MLLT3P42568 568 aaPredicted RBP10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 LSSP48449 732 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SEPHS1P49903 392 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RAB28P51157 221 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MAPK10P53779 464 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CDKN2DP55273 166 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 IL2P60568 153 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 C16orf72Q14CZ0 275 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RTP5Q14D33 572 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 UAP1Q16222 522 aaPredicted RBP10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 GRTP1Q5TC63 336 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TMEM164Q5U3C3 297 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TAOK1Q7L7X3 1001 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PRSS42Q7Z5A4 293 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 UBXN4Q92575 508 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SLC22A18Q96BI1 424 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 LINGO1Q96FE5 620 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CYTH2Q99418 400 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SYTL2Q9HCH5 934 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 THSD1Q9NS62 852 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SOHLH2Q9NX45 425 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ACTR10Q9NZ32 417 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 OR6C2Q9NZP2 312 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SPATA7Q9P0W8 599 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PDP2Q9P2J9 529 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 LNPEPQ9UIQ6 1025 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MED16Q9Y2X0 877 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 IKBKGQ9Y6K9 419 aa10.67□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 A0A087WUV0 522 aaPredicted RBP10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ISM1B1AKI9 464 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 C1QTNF9BB2RNN3 333 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ZBTB14O43829 449 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PSIP1O75475 530 aaKnown RBP10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TNFSF15O95150 251 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MATN4O95460 622 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SYF2O95926 243 aaKnown RBP10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 C8GP07360 202 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ITGA2BP08514 1039 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 C1QTNF9P0C862 333 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 HGFP14210 728 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 KPNA2P52292 529 aaKnown RBP10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RAB15P59190 212 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PPP1CAP62136 330 aa10.66□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 POU4F1Q01851 419 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms