RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CLEC6AQ6EIG7 209 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 ASB15Q8WXK1 588 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 MALSU1Q96EH3 234 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 ARP10275 920 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 RPS3P23396 243 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRIM56-201ENST00000306085 VWA5B1Q5TIE3 1220 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 C1orf94Q6P1W5 598 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF773Q6PK81 442 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 RIT1Q92963 219 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 AGO4Q9HCK5 861 aaKnown RBP13.18□□□□□ -0.3
TRIM56-201ENST00000306085 GLP1RP43220 463 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 KHKP50053 298 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 LIX1Q8N485 282 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 GMCL1P1Q8NEA9 526 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 TOR1AIP2Q8NFQ8 470 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 TWIST2Q8WVJ9 160 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 FCGR1BQ92637 280 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 SPTBP11277 2137 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 H7C417 338 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 CLN5O75503 358 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 CTSOP43234 321 aaPredicted RBP13.18□□□□□ -0.3
TRIM56-201ENST00000306085 BNIP3Q12983 259 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 RFWD3Q6PCD5 774 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 MFSD2AQ8NA29 543 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 SULT4A1Q9BR01 284 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 ASPNQ9BXN1 380 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 FN3KQ9H479 309 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 NUP214P35658 2090 aaPredicted RBP13.18□□□□□ -0.3
TRIM56-201ENST00000306085 PAEPP09466 180 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 NUDT7P0C024 238 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 DCBLD1Q8N8Z6 715 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 ARL8BQ9NVJ2 186 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 CFL2Q9Y281 166 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 IGSF1Q8N6C5 1336 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 C9JVG2 144 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 PSEN2P49810 448 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 ELOAQ14241 798 aaKnown RBP13.18□□□□□ -0.3
TRIM56-201ENST00000306085 CLUHO75153 1309 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 NEDD8-MDP1E9PL57 170 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 TULP2O00295 520 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 OR1F1O43749 312 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 SCGB2A1O75556 95 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 TMBIM6P55061 237 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 ANKRD23Q86SG2 305 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 ATAD1Q8NBU5 361 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 WNT8BQ93098 351 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 POLR1CO15160 346 aaPredicted RBP13.18□□□□□ -0.3
TRIM56-201ENST00000306085 BRINP1O60477 761 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF254O75437 659 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 RBM39Q14498 530 aaKnown RBP13.18□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF674Q2M3X9 581 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 GPR157Q5UAW9 335 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 ADAMTS3O15072 1205 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 RAD51DO75771 328 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 TPPPO94811 219 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 DRD4P21917 467 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 GPR151Q8TDV0 419 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 CENPNQ96H22 339 aaPredicted RBP13.18□□□□□ -0.3
TRIM56-201ENST00000306085 GRID2O43424 1007 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 ALDH3B1P43353 468 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 ARL9Q6T311 187 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 OR8D1Q8WZ84 308 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 FAM83DQ9H4H8 585 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 LRFN1Q9P244 771 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 TTC37Q6PGP7 1564 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 PSMD8P48556 350 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 PAMR1Q6UXH9 720 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 SLC6A7Q99884 636 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 PNO1Q9NRX1 252 aaKnown RBP13.17□□□□□ -0.3
TRIM56-201ENST00000306085 PPP1R14DQ9NXH3 145 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 AGO1Q9UL18 857 aaKnown RBP13.17□□□□□ -0.3
TRIM56-201ENST00000306085 SNRNP200O75643 2136 aaKnown RBP13.17□□□□□ -0.3
TRIM56-201ENST00000306085 USP6P35125 1406 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 MYCLP1P12525 358 aaPredicted RBP13.17□□□□□ -0.3
TRIM56-201ENST00000306085 HTR2AP28223 471 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 GTF2H2Q13888 395 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 HEPACAMQ14CZ8 416 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 GTF2H2CQ6P1K8 395 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 COPS8Q99627 209 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 RNF19AQ9NV58 838 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 LILRB5O75023 590 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 CLDN9O95484 217 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 ERP29P30040 261 aaKnown RBP13.17□□□□□ -0.3
TRIM56-201ENST00000306085 CDKN2CP42773 168 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 ANKDD1AQ495B1 522 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 PM20D2Q8IYS1 436 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 FRZBQ92765 325 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 ADAD1Q96M93 576 aaKnown RBP13.17□□□□□ -0.3
TRIM56-201ENST00000306085 GAD1Q99259 594 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 RAD9AQ99638 391 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 TXN2Q99757 166 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 GADD45GO95257 159 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 ANXA3P12429 323 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 NKX6-1P78426 367 aaPredicted RBP13.17□□□□□ -0.3
TRIM56-201ENST00000306085 NXPE1Q8N323 547 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 ULBP1Q9BZM6 244 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 RANBP3Q9H6Z4 567 aaPredicted RBP13.17□□□□□ -0.3
TRIM56-201ENST00000306085 MRPS23Q9Y3D9 190 aaKnown RBP13.17□□□□□ -0.3
TRIM56-201ENST00000306085 TRBV23OR9-2A0A075B6M9 112 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms