RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 ELK4P28324 431 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 SP140Q13342 867 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 NR6A1Q15406 480 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 MPPE1Q53F39 396 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 ZNF551Q7Z340 670 aaPredicted RBP7.05□□□□□ -1.28
RGPD3-201ENST00000304514 DEFB128Q7Z7B8 93 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 TMEM179BQ7Z7N9 219 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 CLDN19Q8N6F1 224 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 BEND7Q8N7W2 519 aaPredicted RBP7.05□□□□□ -1.28
RGPD3-201ENST00000304514 PPM1MQ96MI6 270 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 CEP44Q9C0F1 390 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 CFAP97Q9P2B7 532 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 FBXO10Q9UK96 956 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 A0A096LPI6 279 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 H3BMQ9 156 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 LEFTY2O00292 366 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 LDLRP01130 860 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 CDKN2CP42773 168 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 MTHFRP42898 656 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 STK19P49842 368 aaPredicted RBP7.05□□□□□ -1.28
RGPD3-201ENST00000304514 C21orf58P58505 322 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 BOP1Q14137 746 aaKnown RBP7.05□□□□□ -1.28
RGPD3-201ENST00000304514 MAP7Q14244 749 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 RBBP5Q15291 538 aaKnown RBP7.05□□□□□ -1.28
RGPD3-201ENST00000304514 KRT80Q6KB66 452 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 TTC33Q6PID6 262 aaPredicted RBP7.05□□□□□ -1.28
RGPD3-201ENST00000304514 RFLNAQ6ZTI6 216 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 PGBD3Q8N328 593 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 CPA6Q8N4T0 437 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 L3MBTL4Q8NA19 623 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 DNAJB8Q8NHS0 232 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 TESCQ96BS2 214 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 TBC1D20Q96BZ9 403 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 CAPNS2Q96L46 248 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 COG8Q96MW5 612 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 TUBA1CQ9BQE3 449 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 C2orf49Q9BVC5 232 aaPredicted RBP7.05□□□□□ -1.28
RGPD3-201ENST00000304514 APOL5Q9BWW9 433 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 SLC12A9Q9BXP2 914 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 CHST8Q9H2A9 424 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 KAT8Q9H7Z6 458 aaKnown RBP7.05□□□□□ -1.28
RGPD3-201ENST00000304514 PCDHB14Q9Y5E9 798 aa7.05□□□□□ -1.28
RGPD3-201ENST00000304514 WASH3PC4AMC7 463 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 GFYI3L273 518 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 SLC16A5O15375 505 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 TGM5O43548 720 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 TRIM16O95361 564 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 C1QCP02747 245 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 VEPH1Q14D04 833 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 C1orf53Q5VUE5 145 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 ATG9BQ674R7 924 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 ELMSAN1Q6PJG2 1045 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 LPCAT2Q7L5N7 544 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 KIAA0907Q7Z7F0 614 aaPredicted RBP7.04□□□□□ -1.28
RGPD3-201ENST00000304514 OFCC1Q8IZS5 231 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 ZNF786Q8N393 782 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 OR2AP1Q8NGE2 309 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 GAB3Q8WWW8 586 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 SCRN2Q96FV2 425 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 LRTM1Q9HBL6 345 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 DCAF13Q9NV06 445 aaKnown RBP7.04□□□□□ -1.28
RGPD3-201ENST00000304514 DDX18Q9NVP1 670 aaKnown RBP7.04□□□□□ -1.28
RGPD3-201ENST00000304514 KCTD5Q9NXV2 234 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 WWOXQ9NZC7 414 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 FADS3Q9Y5Q0 445 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 A0A087WXM4 84 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 FFAR3O14843 346 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 GPR42O15529 346 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 CLDN9O95484 217 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 NSG1P42857 185 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 RGS4P49798 205 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 ARSFP54793 590 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 SLC14A1Q13336 389 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 ATP13A5Q4VNC0 1218 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 HABP4Q5JVS0 413 aaKnown RBP7.04□□□□□ -1.28
RGPD3-201ENST00000304514 AP1ARQ63HQ0 302 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 C22orf39Q6P5X5 142 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 XKR5Q6UX68 686 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 ITFG1Q8TB96 612 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 MAGEE2Q8TD90 523 aaPredicted RBP7.04□□□□□ -1.28
RGPD3-201ENST00000304514 AURKBQ96GD4 344 aaPredicted RBP7.04□□□□□ -1.28
RGPD3-201ENST00000304514 ZNF558Q96NG5 402 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 SEPHS2Q99611 448 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 INPP5KQ9BT40 448 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 MAGED1Q9Y5V3 778 aaPredicted RBP7.04□□□□□ -1.28
RGPD3-201ENST00000304514 TMX2-CTNND1H3BSU7 103 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 TPST1O60507 370 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 B3GALT4O96024 378 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 MT-ND1P03886 318 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 RETP07949 1114 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 HTR1AP08908 422 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 HMOX2P30519 316 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 SOX11P35716 441 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 PIK3CGP48736 1102 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 HLCSP50747 726 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 HMGCS1Q01581 520 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 PLEKHG6Q3KR16 790 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 FAM174BQ3ZCQ3 159 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 CCNYL2Q5T2Q4 361 aa7.04□□□□□ -1.28
RGPD3-201ENST00000304514 ZDHHC20Q5W0Z9 365 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms