RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SCRG1O75711 98 aa25.61■■□□□ 1.69
CDKN2A-201ENST00000304494 MSL3P1P0C860 447 aa25.61■■□□□ 1.69
CDKN2A-201ENST00000304494 SFTPCP11686 197 aa25.61■■□□□ 1.69
CDKN2A-201ENST00000304494 TCP1P17987 556 aaKnown RBP25.61■■□□□ 1.69
CDKN2A-201ENST00000304494 CRTC2Q53ET0 693 aaPredicted RBP25.61■■□□□ 1.69
CDKN2A-201ENST00000304494 SPESP1Q6UW49 350 aa25.61■■□□□ 1.69
CDKN2A-201ENST00000304494 UNC5DQ6UXZ4 953 aa25.61■■□□□ 1.69
CDKN2A-201ENST00000304494 TMEM126BQ8IUX1 230 aa25.61■■□□□ 1.69
CDKN2A-201ENST00000304494 NRTNQ99748 197 aa25.61■■□□□ 1.69
CDKN2A-201ENST00000304494 SEMA4CQ9C0C4 833 aa25.61■■□□□ 1.69
CDKN2A-201ENST00000304494 LHX9Q9NQ69 397 aa25.61■■□□□ 1.69
CDKN2A-201ENST00000304494 FAM237BA0A1B0GVD1 139 aa25.6■■□□□ 1.69
CDKN2A-201ENST00000304494 ZNF185O15231 689 aa25.6■■□□□ 1.69
CDKN2A-201ENST00000304494 SLCO2B1O94956 709 aa25.6■■□□□ 1.69
CDKN2A-201ENST00000304494 CHRM5P08912 532 aaPredicted RBP25.6■■□□□ 1.69
CDKN2A-201ENST00000304494 ST6GAL1P15907 406 aa25.6■■□□□ 1.69
CDKN2A-201ENST00000304494 EIF3BP55884 814 aaKnown RBP25.6■■□□□ 1.69
CDKN2A-201ENST00000304494 CDC20Q12834 499 aa25.6■■□□□ 1.69
CDKN2A-201ENST00000304494 TYSND1Q2T9J0 566 aa25.6■■□□□ 1.69
CDKN2A-201ENST00000304494 VRK3Q8IV63 474 aa25.6■■□□□ 1.69
CDKN2A-201ENST00000304494 EXD3Q8N9H8 876 aa25.6■■□□□ 1.69
CDKN2A-201ENST00000304494 PDLIM2Q96JY6 352 aa25.6■■□□□ 1.69
CDKN2A-201ENST00000304494 SERPINB12Q96P63 405 aa25.6■■□□□ 1.69
CDKN2A-201ENST00000304494 TRAPPC9Q96Q05 1148 aa25.6■■□□□ 1.69
CDKN2A-201ENST00000304494 PCDHB3Q9Y5E6 796 aa25.6■■□□□ 1.69
CDKN2A-201ENST00000304494 H3BMM5 538 aa25.59■■□□□ 1.69
CDKN2A-201ENST00000304494 NKX2-8O15522 239 aa25.59■■□□□ 1.69
CDKN2A-201ENST00000304494 NTRK1P04629 796 aa25.59■■□□□ 1.69
CDKN2A-201ENST00000304494 TCN2P20062 427 aa25.59■■□□□ 1.69
CDKN2A-201ENST00000304494 OGNP20774 298 aaKnown RBP25.59■■□□□ 1.69
CDKN2A-201ENST00000304494 PPP1R7Q15435 360 aa25.59■■□□□ 1.69
CDKN2A-201ENST00000304494 OTOAQ7RTW8 1153 aa25.59■■□□□ 1.69
CDKN2A-201ENST00000304494 VPS9D1Q9Y2B5 631 aa25.59■■□□□ 1.69
CDKN2A-201ENST00000304494 MRFAP1Q9Y605 127 aa25.59■■□□□ 1.69
CDKN2A-201ENST00000304494 C21orf140B9A014 251 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 GOLGA8KD6RF30 607 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 GOLGA8TH3BQL2 631 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 GOLGA8MH3BSY2 632 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 TERTO14746 1132 aaKnown RBP25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 ESR1P03372 595 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 FAM87AP0C7U9 286 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 TPBGLP0DKB5 382 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 PRKAR1AP10644 381 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 UGT2B7P16662 529 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 ADARP55265 1226 aaKnown RBP25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 ABRQ12979 859 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 DHX34Q14147 1143 aaKnown RBP25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 DCUN1D3Q8IWE4 304 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 PPIL6Q8IXY8 311 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 NAT8LQ8N9F0 302 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 CFAP61Q8NHU2 1237 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 LPGAT1Q92604 370 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 OR2A14Q96R47 310 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 SERTAD3Q9UJW9 196 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 PCDHGA6Q9Y5G7 932 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 ATRXP46100 2492 aa25.58■■□□□ 1.69
CDKN2A-201ENST00000304494 F8A1P23610 371 aa25.57■■□□□ 1.68
CDKN2A-201ENST00000304494 RAB28P51157 221 aa25.57■■□□□ 1.68
CDKN2A-201ENST00000304494 KIR2DS3Q14952 304 aa25.57■■□□□ 1.68
CDKN2A-201ENST00000304494 ANKRD20A4Q4UJ75 823 aa25.57■■□□□ 1.68
CDKN2A-201ENST00000304494 PLEKHS1Q5SXH7 462 aa25.57■■□□□ 1.68
CDKN2A-201ENST00000304494 NEPROQ6NW34 567 aa25.57■■□□□ 1.68
CDKN2A-201ENST00000304494 TTC23LQ6PF05 361 aa25.57■■□□□ 1.68
CDKN2A-201ENST00000304494 ZNF669Q96BR6 464 aaPredicted RBP25.57■■□□□ 1.68
CDKN2A-201ENST00000304494 TCTN2Q96GX1 697 aa25.57■■□□□ 1.68
CDKN2A-201ENST00000304494 BIRC8Q96P09 236 aa25.57■■□□□ 1.68
CDKN2A-201ENST00000304494 PLAGL1Q9UM63 463 aa25.57■■□□□ 1.68
CDKN2A-201ENST00000304494 MRPS18BQ9Y676 258 aaKnown RBP25.57■■□□□ 1.68
CDKN2A-201ENST00000304494 TMEM150CB9EJG8 249 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 KATNA1O75449 491 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 PVRP15151 417 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 PKLRP30613 574 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 FMO4P31512 558 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 CCR10P46092 362 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 DNASE1L3Q13609 305 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 KYNUQ16719 465 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 CTSL3PQ5NE16 218 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 C16orf46Q6P387 395 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 TMEM135Q86UB9 458 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 CILP2Q8IUL8 1156 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 C19orf47Q8N9M1 422 aaKnown RBP25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 CT55Q8WUE5 264 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 LRFN5Q96NI6 719 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 TWSG1Q9GZX9 223 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 KLHL25Q9H0H3 589 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 ADNPQ9H2P0 1102 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 INTS10Q9NVR2 710 aaKnown RBP25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 SPHK1Q9NYA1 384 aa25.56■■□□□ 1.68
CDKN2A-201ENST00000304494 A0A0J9YY10 115 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 USP27XA6NNY8 438 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 ISM1B1AKI9 464 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 KLK3P07288 261 aaPredicted RBP25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 CYP2A7P20853 494 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 OAS2P29728 719 aaKnown RBP25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 MAGEA3P43357 314 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 GNG11P61952 73 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 THOC5Q13769 683 aaKnown RBP25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 SLC5A12Q1EHB4 618 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 ZNF605Q86T29 641 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 SKA2Q8WVK7 121 aaPredicted RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms