RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 HMOX2P30519 316 aa15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 MAT2AP31153 395 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 IRX1P78414 480 aaPredicted RBP15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 NFE2L1Q14494 772 aa15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 ZRSR2Q15696 482 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 PTCHD3Q3KNS1 767 aa15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 PLA2G4EQ3MJ16 856 aa15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 DNAL1Q4LDG9 190 aa15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 C11orf96Q7Z7L8 435 aa15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 DCBLD1Q8N8Z6 715 aa15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 SNX31Q8N9S9 440 aa15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 MAFAQ8NHW3 353 aaPredicted RBP15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 RP9Q8TA86 221 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 FOXJ1Q92949 421 aa15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 MCUR1Q96AQ8 359 aa15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 MARK4Q96L34 752 aa15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 TRPS1Q9UHF7 1281 aa15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 POLG2Q9UHN1 485 aa15.33■□□□□ 0.04
HERPUD1-201ENST00000300302 LRRC72A6NJI9 287 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 GABRG2P18507 467 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 ATP4BP51164 291 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 TPMTP51580 245 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 STX1BP61266 288 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 LONP2Q86WA8 852 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 ARHGAP24Q8N264 748 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 SYNPOQ8N3V7 929 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 OXR1Q8N573 874 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 POU5F2Q8N7G0 328 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 MAGEC3Q8TD91 643 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 MAGEB10Q96LZ2 347 aaPredicted RBP15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 BTBD1Q9H0C5 482 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 RMI1Q9H9A7 625 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 DNAJC11Q9NVH1 559 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 ZNHIT2Q9UHR6 403 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 PTGDR2Q9Y5Y4 395 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 ST14Q9Y5Y6 855 aa15.32■□□□□ 0.04
HERPUD1-201ENST00000300302 LOC100653049A0A140TA62 436 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 LOC730098B7Z3J9 87 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 CACNB4O00305 520 aaPredicted RBP15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 KRT34O76011 436 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 CLDN9O95484 217 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 C1orf105O95561 183 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 IGFALSP35858 605 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 DGKEP52429 567 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 PPP2CBP62714 309 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 PPP2CAP67775 309 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 PRKCQQ04759 706 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 CYLC2Q14093 348 aaPredicted RBP15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 LRRC32Q14392 662 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 HERC3Q15034 1050 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 XKR7Q5GH72 579 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 UNC5DQ6UXZ4 953 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 TRIM69Q86WT6 500 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 RBM15BQ8NDT2 890 aaKnown RBP15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 OR2T34Q8NGX1 318 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 ACTR8Q9H981 624 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 PRKAB1Q9Y478 270 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 SLC31A1O15431 190 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 GSC2O15499 205 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 BDKRB1P46663 353 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 MAPRE2Q15555 327 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 OGFOD2Q6N063 350 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 IL27RAQ6UWB1 636 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 SPATA19Q7Z5L4 167 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 PGBD3Q8N328 593 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 DENND6BQ8NEG7 585 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 HMGB4Q8WW32 186 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 MIPEPQ99797 713 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 APOOQ9BUR5 198 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 SLC29A3Q9BZD2 475 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 ATG10Q9H0Y0 220 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 RASSF4Q9H2L5 321 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 SGK2Q9HBY8 427 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 STOX2Q9P2F5 926 aaPredicted RBP15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 SLC22A14Q9Y267 594 aa15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 MRPS17Q9Y2R5 130 aaKnown RBP15.31■□□□□ 0.04
HERPUD1-201ENST00000300302 PSMD12O00232 456 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 CHRNB1P11230 501 aa15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 ACSL1P33121 698 aa15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 ELF3P78545 371 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 ZXDCQ2QGD7 858 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 FAM219BQ5XKK7 198 aa15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 AGTRAPQ6RW13 159 aa15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 FAM83HQ6ZRV2 1179 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 RNF165Q6ZSG1 346 aa15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 PDZD3Q86UT5 571 aa15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 SNX32Q86XE0 403 aa15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 MYLK4Q86YV6 388 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 PYCR2Q96C36 320 aa15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 PKP4Q99569 1192 aa15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 RTKNQ9BST9 563 aa15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 CADM1Q9BY67 442 aaKnown RBP15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 OR52A5Q9H2C5 316 aa15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 MMADHCQ9H3L0 296 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 ITM2CQ9NQX7 267 aa15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 CA14Q9ULX7 337 aa15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 PCYT1BQ9Y5K3 369 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 ZFC3H1O60293 1989 aaKnown RBP15.3■□□□□ 0.04
HERPUD1-201ENST00000300302 PEX11AO75192 247 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms