RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 GREB1Q4ZG55 1949 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 DRGXA6NNA5 263 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 KERAO60938 352 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 UPK1BO75841 260 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 HOXD9P28356 352 aaPredicted RBP15.29■□□□□ 0.04
UBAP1-201ENST00000297661 CD47Q08722 323 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 VAC14Q08AM6 782 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 RSBN1Q5VWQ0 802 aaPredicted RBP15.29■□□□□ 0.04
UBAP1-201ENST00000297661 SLX4IPQ5VYV7 408 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 ANKS6Q68DC2 871 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 BLOC1S3Q6QNY0 202 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 LINGO4Q6UY18 593 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 RALGPS2Q86X27 583 aaPredicted RBP15.29■□□□□ 0.04
UBAP1-201ENST00000297661 OR52B6Q8NGF0 335 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 EEF1AKMT1Q8WVE0 214 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 KIAA1191Q96A73 305 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 TRIM54Q9BYV2 358 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 DSN1Q9H410 356 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 TFB2MQ9H5Q4 396 aaKnown RBP15.29■□□□□ 0.04
UBAP1-201ENST00000297661 TLR8Q9NR97 1041 aaKnown RBP15.29■□□□□ 0.04
UBAP1-201ENST00000297661 TMEM39AQ9NV64 488 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 PAK1IP1Q9NWT1 392 aaPredicted RBP15.29■□□□□ 0.04
UBAP1-201ENST00000297661 GPR45Q9Y5Y3 372 aa15.29■□□□□ 0.04
UBAP1-201ENST00000297661 OAS3Q9Y6K5 1087 aaKnown RBP15.29■□□□□ 0.04
UBAP1-201ENST00000297661 FAM172BPA6NC97 362 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 TBC1D4O60343 1298 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 NDST3O95803 873 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 CYBBP04839 570 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 PCNAP12004 261 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 PIGAP37287 484 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 HK3P52790 923 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 RAD51Q06609 339 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 DSC1Q08554 894 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 LAIR2Q6ISS4 152 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 RBM23Q86U06 439 aaKnown RBP15.28■□□□□ 0.04
UBAP1-201ENST00000297661 FAR1Q8WVX9 515 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 TRIM43Q96BQ3 446 aaPredicted RBP15.28■□□□□ 0.04
UBAP1-201ENST00000297661 TRIB3Q96RU7 358 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 PDFQ9HBH1 243 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 SLC52A3Q9NQ40 469 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 FNIP2Q9P278 1114 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 ALPK3Q96L96 1907 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 ISPDA4D126 451 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 F5H5T6 163 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 CBX4O00257 560 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 KMOO15229 486 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 TBX1O43435 398 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 OR4F21O95013 312 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 SPNP16150 400 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 HRH2P25021 359 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 IL12AP29459 219 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 SUOXP51687 545 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 ZNF140P52738 457 aaPredicted RBP15.28■□□□□ 0.04
UBAP1-201ENST00000297661 NCS1P62166 190 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 EMX1Q04741 257 aaPredicted RBP15.28■□□□□ 0.04
UBAP1-201ENST00000297661 FOXM1Q08050 763 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 C16orf59Q7L2K0 433 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 DEFB128Q7Z7B8 93 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 SLC43A3Q8NBI5 491 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 GPR150Q8NGU9 434 aa15.28■□□□□ 0.04
UBAP1-201ENST00000297661 AURKBQ96GD4 344 aaPredicted RBP15.28■□□□□ 0.04
UBAP1-201ENST00000297661 CDK5RAP1Q96SZ6 601 aaKnown RBP15.28■□□□□ 0.04
UBAP1-201ENST00000297661 CINPQ9BW66 212 aaPredicted RBP15.28■□□□□ 0.04
UBAP1-201ENST00000297661 SLC1A7O00341 560 aa15.27■□□□□ 0.04
UBAP1-201ENST00000297661 RAD51BO15315 384 aa15.27■□□□□ 0.04
UBAP1-201ENST00000297661 MAGP20916 626 aa15.27■□□□□ 0.04
UBAP1-201ENST00000297661 FSHRP23945 695 aa15.27■□□□□ 0.04
UBAP1-201ENST00000297661 KCNK10P57789 538 aa15.27■□□□□ 0.04
UBAP1-201ENST00000297661 CRY1Q16526 586 aa15.27■□□□□ 0.04
UBAP1-201ENST00000297661 SPATS1Q496A3 300 aa15.27■□□□□ 0.04
UBAP1-201ENST00000297661 ZRANB3Q5FWF4 1079 aa15.27■□□□□ 0.04
UBAP1-201ENST00000297661 RIMKLAQ8IXN7 391 aa15.27■□□□□ 0.04
UBAP1-201ENST00000297661 RHEBL1Q8TAI7 183 aa15.27■□□□□ 0.04
UBAP1-201ENST00000297661 BCL7BQ9BQE9 202 aa15.27■□□□□ 0.04
UBAP1-201ENST00000297661 AMBRA1Q9C0C7 1298 aa15.27■□□□□ 0.04
UBAP1-201ENST00000297661 SMURF2Q9HAU4 748 aa15.27■□□□□ 0.04
UBAP1-201ENST00000297661 EYSQ5T1H1 3165 aa15.27■□□□□ 0.04
UBAP1-201ENST00000297661 SCO2O43819 266 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 CCNKO75909 580 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 GJB5O95377 273 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 VNN2O95498 520 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 C1RP00736 705 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 TRPC1P48995 793 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 TYSND1Q2T9J0 566 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 CCDC58Q4VC31 144 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 STEAP3Q658P3 488 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 DESI1Q6ICB0 168 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 DENND1CQ8IV53 801 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 ZNF555Q8NEP9 628 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 RORBQ92753 470 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 LINGO1Q96FE5 620 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 FUBP3Q96I24 572 aaKnown RBP eCLIP15.27■□□□□ 0.03
UBAP1-201ENST00000297661 SLIRPQ9GZT3 109 aaKnown RBP15.27■□□□□ 0.03
UBAP1-201ENST00000297661 GKN1Q9NS71 199 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 CD274Q9NZQ7 290 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 NAALAD2Q9Y3Q0 740 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 SCN5AQ14524 2016 aa15.27■□□□□ 0.03
UBAP1-201ENST00000297661 VWA8A3KMH1 1905 aa15.26■□□□□ 0.03
UBAP1-201ENST00000297661 TAF4O00268 1085 aa15.26■□□□□ 0.03
UBAP1-201ENST00000297661 KATNA1O75449 491 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms