RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 RNF128Q8TEB7 428 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 TMEM159Q96B96 161 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 DYNLL2Q96FJ2 89 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 POMPQ9Y244 141 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 DLGAP4Q9Y2H0 992 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 ASTN1O14525 1302 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 A0A0D9SG52 128 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 RFXANKO14593 260 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 XKRYO14609 159 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 USP12O75317 370 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 SEC22BO75396 215 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 BBOX1O75936 387 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 ALPPP05187 535 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 HLA-FP30511 346 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 GRIA4P48058 902 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 DHPSP49366 369 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-201ENST00000297405 RAPSNQ13702 412 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 COL19A1Q14993 1142 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 SUPT20HL1Q3ZLR7 823 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 FUT11Q495W5 492 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 NADK2Q4G0N4 442 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 COQ5Q5HYK3 327 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 PNCKQ6P2M8 343 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 RFPL4BQ6ZWI9 263 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 CARM1Q86X55 608 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 KIAA0895Q8NCT3 520 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 PIGXQ8TBF5 258 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 SGK3Q96BR1 496 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 MYOCQ99972 504 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 VPS25Q9BRG1 176 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 SEC14L3Q9UDX4 400 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 ADGRE2Q9UHX3 823 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 PCDHB12Q9Y5F1 795 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 A0A075B6Q4 140 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 CYP27B1O15528 508 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 RBMXL2O75526 392 aaKnown RBP4.77□□□□□ -1.65
CSMD3-201ENST00000297405 IL13P35225 146 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 XKR3Q5GH77 459 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 RASGRP3Q8IV61 690 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 PAPD5Q8NDF8 572 aaKnown RBP4.77□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF486Q96H40 463 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-201ENST00000297405 GTF2A1LQ9UNN4 478 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 A0A1W2PQ67 120 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 BTBD17A6NE02 478 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 PRORSD1PA6NEY8 169 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 NPHS1O60500 1241 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 PRAMEF12O95522 483 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 FABP3P05413 133 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 UROSP10746 265 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 PRPS2P11908 318 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 TPH1P17752 444 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 AXLP30530 894 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 KIR3DL1P43629 444 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 CENPAP49450 140 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 SMSP52788 366 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 GRIK2Q13002 908 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 GAS6Q14393 721 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 GRM3Q14832 879 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 TBC1D25Q3MII6 688 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 PAQR7Q86WK9 346 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 GEMIN6Q8WXD5 167 aaKnown RBP4.77□□□□□ -1.65
CSMD3-201ENST00000297405 KCNJ16Q9NPI9 418 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF69Q9UC07 566 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 SRRDQ9UH36 339 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 CRB1P82279 1406 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 AURKAO14965 403 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 KIAA0355O15063 1070 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 ZBTB14O43829 449 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 SNCGO76070 127 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 CDK1P06493 297 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 GBX2P52951 348 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-201ENST00000297405 GTF2H2Q13888 395 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 DCST1Q5T197 706 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 GTF2H2CQ6P1K8 395 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 RPL22L1Q6P5R6 122 aaKnown RBP4.77□□□□□ -1.65
CSMD3-201ENST00000297405 FITM2Q8N6M3 262 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 TEX19Q8NA77 164 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 OR2AP1Q8NGE2 309 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 ST7LQ8TDW4 575 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 HTR3CQ8WXA8 447 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 COPS5Q92905 334 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 GTPBP3Q969Y2 492 aaKnown RBP4.77□□□□□ -1.65
CSMD3-201ENST00000297405 BORCS7Q96B45 105 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 TLCD1Q96CP7 247 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 NDC1Q9BTX1 674 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF282Q9UDV7 671 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-201ENST00000297405 EIF2B4Q9UI10 523 aaKnown RBP4.77□□□□□ -1.65
CSMD3-201ENST00000297405 DUOX1Q9NRD9 1551 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 H7C1W4 665 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 HBE1P02100 147 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 SERPIND1P05546 499 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 TFEBP19484 476 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 RYKP34925 604 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 H3F3AP84243 136 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 REEP5Q00765 189 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 EIF4HQ15056 248 aaKnown RBP4.76□□□□□ -1.65
CSMD3-201ENST00000297405 CDK10Q15131 360 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 EPHA7Q15375 998 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 WDR72Q3MJ13 1102 aa4.76□□□□□ -1.65
CSMD3-201ENST00000297405 HYIQ5T013 277 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms