RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 MOGQ16653 247 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 TMEM236Q5W0B7 351 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 SLC34A3Q8N130 599 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 ASZ1Q8WWH4 475 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 UBE2E3Q969T4 207 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 CRISPLD1Q9H336 500 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 POLR1DQ9Y2S0 133 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 A8MV72 311 aaPredicted RBP13.19□□□□□ -0.3
HPS3-201ENST00000296051 ZNF99A8MXY4 864 aaPredicted RBP13.19□□□□□ -0.3
HPS3-201ENST00000296051 FAM220BPB1ANY3 271 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 H3BQ06 376 aaPredicted RBP13.19□□□□□ -0.3
HPS3-201ENST00000296051 FFAR2O15552 330 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 CA3P07451 260 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 GALTP07902 379 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 SPIBQ01892 262 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 SLC10A7Q0GE19 358 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 PYDC2Q56P42 97 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 KIAA0408Q6ZU52 694 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 SPATA19Q7Z5L4 167 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 CFAP206Q8IYR0 622 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 SIDT2Q8NBJ9 832 aaKnown RBP13.19□□□□□ -0.3
HPS3-201ENST00000296051 CYB5D2Q8WUJ1 264 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 TOP1MTQ969P6 601 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 TRIM63Q969Q1 353 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 HMCESQ96FZ2 354 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 MAGEH1Q9H213 219 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 MAGEE1Q9HCI5 957 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 GPN3Q9UHW5 284 aaPredicted RBP13.19□□□□□ -0.3
HPS3-201ENST00000296051 CCDC162PA2VCL2 907 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 URADA6NGE7 173 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 SLC35E2BP0CK96 405 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 ITPKAP23677 461 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 CCNCP24863 283 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 NOS3P29474 1203 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 GNPDA1P46926 289 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 CREB5Q02930 508 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 CLEC20AQ6ZU45 233 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 ZDHHC21Q8IVQ6 265 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 ACVR1CQ8NER5 493 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 IGSF21Q96ID5 467 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 SLC45A3Q96JT2 553 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 TRPV5Q9NQA5 729 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 KLHL1Q9NR64 748 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 CNTN3Q9P232 1028 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 GMPR2Q9P2T1 348 aaKnown RBP13.19□□□□□ -0.3
HPS3-201ENST00000296051 EMCNQ9ULC0 261 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 SPTA1P02549 2419 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 CCDC182A6NF36 153 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 NIPSNAP2O75323 286 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 NDST3O95803 873 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 AIF1P55008 147 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 TUBA4AP68366 448 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 TAPT1Q6NXT6 567 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 GPR65Q8IYL9 337 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 TIFAQ96CG3 184 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 COPS4Q9BT78 406 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 DHRS4Q9BTZ2 278 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 IL23AQ9NPF7 189 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 ACTR3BQ9P1U1 418 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 ZNF221Q9UK13 617 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 TESMINQ9Y4I5 508 aa13.19□□□□□ -0.3
HPS3-201ENST00000296051 CDC7O00311 574 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 CXCR6O00574 342 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 FPGTO14772 594 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 IFNA14P01570 189 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 EDN1P05305 212 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 RAP2AP10114 183 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 KCNQ1P51787 676 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 TIMM50Q3ZCQ8 353 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 SNX29P2Q8IUI4 249 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 TTC29Q8NA56 475 aaPredicted RBP13.18□□□□□ -0.3
HPS3-201ENST00000296051 MYDGFQ969H8 173 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 LRRC3Q9BY71 257 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 SPRTNQ9H040 489 aaPredicted RBP13.18□□□□□ -0.3
HPS3-201ENST00000296051 NKX2-4Q9H2Z4 354 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 EFCAB9A8MZ26 197 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 PLOD3O60568 738 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 SNX4O95219 450 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 ACTR1BP42025 376 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 ACTR1AP61163 376 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 KIAA0930Q6ICG6 404 aaPredicted RBP13.18□□□□□ -0.3
HPS3-201ENST00000296051 ADAMTSL2Q86TH1 951 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 SERINC5Q86VE9 423 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 EPHX4Q8IUS5 362 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 CELF5Q8N6W0 485 aaKnown RBP13.18□□□□□ -0.3
HPS3-201ENST00000296051 SMG8Q8ND04 991 aaKnown RBP13.18□□□□□ -0.3
HPS3-201ENST00000296051 PHF10Q8WUB8 498 aaKnown RBP13.18□□□□□ -0.3
HPS3-201ENST00000296051 GAB3Q8WWW8 586 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 TDRD1Q9BXT4 1180 aaKnown RBP13.18□□□□□ -0.3
HPS3-201ENST00000296051 SACM1LQ9NTJ5 587 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 ZNF624Q9P2J8 865 aaPredicted RBP13.18□□□□□ -0.3
HPS3-201ENST00000296051 VPS4AQ9UN37 437 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 CROCCQ5TZA2 2017 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 RPP40O75818 363 aaKnown RBP13.18□□□□□ -0.3
HPS3-201ENST00000296051 NTSP30990 170 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 CPOXP36551 454 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 HERVK_113P63132 956 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 C11orf91Q3C1V1 193 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 ADGRF1Q5T601 910 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 PIWIL3Q7Z3Z3 882 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms