RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 SNPHO15079 494 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 KERAO60938 352 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 MLYCDO95822 493 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 RETP07949 1114 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 CYP4B1P13584 511 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 RFC2P35250 354 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 PIGAP37287 484 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 GSSP48637 474 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 MLLT10P55197 1068 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 ADRM1Q16186 407 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 MEP1AQ16819 746 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 RTP2Q5QGT7 225 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 METTL2BQ6P1Q9 378 aaKnown RBP13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 C17orf99Q6UX52 265 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 GPSM1Q86YR5 675 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 TMEM126BQ8IUX1 230 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 ATP6V0D2Q8N8Y2 350 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 LINC01599Q8WXQ3 324 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 TMBIM1Q969X1 311 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 UHRF1Q96T88 793 aaPredicted RBP13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 CCDC90BQ9GZT6 254 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 SCML2Q9UQR0 700 aa13.02□□□□□ -0.32
KCNIP3-201ENST00000295225 TCRBV5S2A0A599 114 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 H0Y858 1186 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 LRATO95237 230 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 TSPAN12O95859 305 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 KLKB1P03952 638 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 SLC2A4P14672 509 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 HOXC8P31273 242 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 ASMTP46597 345 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 FLT3LGP49771 235 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 RPL26P61254 145 aaKnown RBP13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 ESRRGP62508 458 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 GALNT1Q10472 559 aaPredicted RBP13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 SF1Q15637 639 aaKnown RBP13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 ATP6AP1Q15904 470 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 GLB1LQ6UWU2 654 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 UTS2BQ765I0 119 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 GALNT5Q7Z7M9 940 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 ERI1Q8IV48 349 aaKnown RBP13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 FAM126BQ8IXS8 530 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 MINDY1Q8N5J2 469 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 NKAIN3Q8N8D7 197 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 ZNF565Q8N9K5 539 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 DDHD1Q8NEL9 900 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 OR4F6Q8NGB9 312 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 TANKQ92844 425 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 KIAA1191Q96A73 305 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 FAM193BQ96PV7 902 aaPredicted RBP13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 RHNO1Q9BSD3 238 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 C17orf80Q9BSJ5 609 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 ACTL8Q9H568 366 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 EPS8L2Q9H6S3 715 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 PRM3Q9NNZ6 103 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 GID8Q9NWU2 228 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 SMPD3Q9NY59 655 aaPredicted RBP13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 IFT80Q9P2H3 777 aaPredicted RBP13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 CNOT11Q9UKZ1 510 aaKnown RBP13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 TANC1Q9C0D5 1861 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 PRAMEF11O60813 436 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 DUSP11O75319 330 aaKnown RBP13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 RASGRP1O95267 797 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 ACY1Q03154 408 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 TGFBIQ15582 683 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 ATP6AP1LQ52LC2 224 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 MRPL10Q7Z7H8 261 aaKnown RBP13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 RASAL3Q86YV0 1011 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 HCAR2Q8TDS4 363 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 METTL2AQ96IZ6 378 aaKnown RBP13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 HOPXQ9BPY8 73 aaPredicted RBP13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 ING2Q9H160 280 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 TRMT6Q9UJA5 497 aaKnown RBP13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 PTPRDP23468 1912 aa13.02□□□□□ -0.33
KCNIP3-201ENST00000295225 TRPM7Q96QT4 1865 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 ARHGEF15O94989 841 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 VNN2O95498 520 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 LDLRP01130 860 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 IL10RBQ08334 325 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 BFSP2Q13515 415 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 RCAN2Q14206 197 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 SSPNQ14714 243 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 AP5B1Q2VPB7 878 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 ZER1Q7Z7L7 766 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 CD200R1Q8TD46 325 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 GIPC3Q8TF64 312 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 ZNF599Q96NL3 588 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 TRMOQ9BU70 441 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 AIG1Q9NVV5 245 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 LUZP4Q9P127 313 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 PCDHB5Q9Y5E4 795 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 RAI2Q9Y5P3 530 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 A0A087WXM4 84 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 F5H5T6 163 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 POP4O95707 220 aaKnown RBP13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 AGR2O95994 175 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 FGF4P08620 206 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 ALOX5P09917 674 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 M6PRP20645 277 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 MYF6P23409 242 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 CTHP32929 405 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms