RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 ALPK3Q96L96 1907 aa18.63■□□□□ 0.57
SHF-201ENST00000290894 ELFN1P0C7U0 828 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 ZNF30P17039 623 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 OR4D2P58180 307 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 CYP51A1Q16850 503 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 UGT2A3Q6UWM9 527 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 DLEU7Q6UYE1 221 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 KIAA0907Q7Z7F0 614 aaPredicted RBP18.62■□□□□ 0.57
SHF-201ENST00000290894 UBTD2Q8WUN7 234 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 ACPTQ9BZG2 426 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 LRTM1Q9HBL6 345 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 SLC8A2Q9UPR5 921 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 PRAMEF4O60810 478 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 HNRNPA1P09651 372 aaKnown RBP eCLIP18.62■□□□□ 0.57
SHF-201ENST00000290894 CISD3P0C7P0 127 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 VARSP26640 1264 aaKnown RBP18.62■□□□□ 0.57
SHF-201ENST00000290894 PEX19P40855 299 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 GNPDA1P46926 289 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 CCSMST1Q4G0I0 132 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 SPANXN4Q5MJ08 99 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 HENMT1Q5T8I9 393 aaKnown RBP18.62■□□□□ 0.57
SHF-201ENST00000290894 PRAMEF9Q5VWM5 478 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 ZDHHC20Q5W0Z9 365 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 TSPEARQ8WU66 669 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 SELENOMQ8WWX9 145 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 ACTR3BQ9P1U1 418 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 ATG2BQ96BY7 2078 aa18.62■□□□□ 0.57
SHF-201ENST00000290894 CXorf51AA0A1B0GTR3 108 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 PDLIM1O00151 329 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 NUAK1O60285 661 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 B3GALT4O96024 378 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 NELFEP18615 380 aaKnown RBP18.61■□□□□ 0.57
SHF-201ENST00000290894 RASGEF1AQ8N9B8 481 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 SEPHS2Q99611 448 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 EFHD1Q9BUP0 239 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 MARK1Q9P0L2 795 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 EIF3LQ9Y262 564 aaKnown RBP18.61■□□□□ 0.57
SHF-201ENST00000290894 DLGAP4Q9Y2H0 992 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 PABPN1LA6NDY0 278 aaKnown RBP18.61■□□□□ 0.57
SHF-201ENST00000290894 CFAP99D6REC4 459 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 K7ESM1 405 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 DFNA5O60443 496 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 HOXA9P31269 272 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 FOXM1Q08050 763 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 ZNF284Q2VY69 593 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 CACUL1Q86Y37 369 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 TMEM126BQ8IUX1 230 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 CELF5Q8N6W0 485 aaKnown RBP18.61■□□□□ 0.57
SHF-201ENST00000290894 LMNTD1Q8N9Z9 388 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 CATSPER1Q8NEC5 780 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 GFM2Q969S9 779 aaKnown RBP18.61■□□□□ 0.57
SHF-201ENST00000290894 AP2M1Q96CW1 435 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 SLC24A3Q9HC58 644 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 CCM2LQ9NUG4 571 aaPredicted RBP18.61■□□□□ 0.57
SHF-201ENST00000290894 VAPAQ9P0L0 249 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 PRUNE2Q8WUY3 3088 aa18.61■□□□□ 0.57
SHF-201ENST00000290894 SH3BGRLO75368 114 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 PSMA4P25789 261 aaKnown RBP18.6■□□□□ 0.57
SHF-201ENST00000290894 MRPL19P49406 292 aaKnown RBP18.6■□□□□ 0.57
SHF-201ENST00000290894 CHN2P52757 468 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 ST8SIA6P61647 398 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 BNIP2Q12982 314 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 LCN8Q6JVE9 175 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 IYDQ6PHW0 289 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 LIPIQ6XZB0 460 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 RAVER1Q8IY67 606 aaKnown RBP18.6■□□□□ 0.57
SHF-201ENST00000290894 HERVK_113Q902F9 699 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 DPY30Q9C005 99 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 ELOVL6Q9H5J4 265 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 RPF2Q9H7B2 306 aaKnown RBP18.6■□□□□ 0.57
SHF-201ENST00000290894 TRPS1Q9UHF7 1281 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 SOCS2O14508 198 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 PGM3O95394 542 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 C8GP07360 202 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 MMP12P39900 470 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 GRIA2P42262 883 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 GBX1Q14549 363 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 FAM78AQ5JUQ0 283 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 HID1Q8IV36 788 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 ZUFSPQ96AP4 578 aa18.6■□□□□ 0.57
SHF-201ENST00000290894 A0A1W2PQ67 120 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 SLC28A1O00337 649 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 ZNF197O14709 1029 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 SLC9A3R1O14745 358 aaPredicted RBP18.59■□□□□ 0.57
SHF-201ENST00000290894 LRATO95237 230 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 JAK1P23458 1154 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 PDHA2P29803 388 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 HALP42357 657 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 GTDC1Q4AE62 458 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 FNDC3BQ53EP0 1204 aaKnown RBP18.59■□□□□ 0.57
SHF-201ENST00000290894 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.59■□□□□ 0.57
SHF-201ENST00000290894 TRIM46Q7Z4K8 759 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 ADGRG5Q8IZF4 528 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 ZNF557Q8N988 423 aaPredicted RBP18.59■□□□□ 0.57
SHF-201ENST00000290894 LEMD2Q8NC56 503 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 MCOLN3Q8TDD5 553 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 OSCP1Q8WVF1 389 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 ASZ1Q8WWH4 475 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 SLC13A3Q8WWT9 602 aa18.59■□□□□ 0.57
SHF-201ENST00000290894 USP7Q93009 1102 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms